Hyphomicrobium denitrificans 1NES1: HYPDE_39278
Help
Entry
HYPDE_39278 CDS
T02646
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt01501
beta-Lactam resistance
hdt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYPDE_39278
01503 Cationic antimicrobial peptide (CAMP) resistance
HYPDE_39278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hdt03036
]
HYPDE_39278
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdt02000
]
HYPDE_39278
01504 Antimicrobial resistance genes [BR:
hdt01504
]
HYPDE_39278
Chromosome and associated proteins [BR:
hdt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HYPDE_39278
Transporters [BR:
hdt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HYPDE_39278
Antimicrobial resistance genes [BR:
hdt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYPDE_39278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
YknX_C
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
CzcB_C
Biotin_lipoyl
BSH_YhbJ
BSH_CzcB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
AGK59525
UniProt:
N0BHC6
LinkDB
All DBs
Position
complement(3319335..3320393)
Genome browser
AA seq
352 aa
AA seq
DB search
MAFSQSAPQQVSVGVVAAERKPIAKSLDFVGRIEAIDRVEIKARVTGYLEAVEFKEGDLV
QAGASLYKIEKGLFQAAVGEAAGALDRSKAAKVLSEVQLQRAEELYERNVGSAVARDQAR
AADEQAKGTILIDQANLDTAKINLSYTDIVAPVTGKIGRTNVTKGNVVSPESGPLTIIVS
QDPMYVTFPVSQREFLRLQQTGQQLDVTQLKASLRFADLSKYDQEGTVNFVDVTVNRTTD
TVLVRASFPNPKGALVDGQLVHVSIKAGKPVEKVVIPQSALIADQQGTYVFVVDEGKAAI
RRVRTGGESGGTNIVIEEGLSGGEQVIVDGLQSVRPGTAVIATPTPQLQDRS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttggccttttctcagtctgctcctcaacaagtctccgtcggcgtcgtagccgccgagcgt
aagccaatcgccaaatcactggatttcgtcggacgtatcgaggcaatcgaccgggttgag
atcaaggcgcgtgtcaccggttacctggaagcggtcgaattcaaggaaggggatttagtc
caagccggcgcttccctctacaaaattgagaagggcctgtttcaggccgcggttggagag
gccgcaggcgcgctcgaccggagtaaggccgccaaagtattgagcgaagtccagctgcaa
cgtgctgaagaattgtatgagagaaatgttggttcggccgttgcccgagaccaggcacgc
gccgccgatgaacaagccaagggcacaattcttatcgatcaggcaaacctcgacacggcc
aagatcaacctcagctacactgatattgttgctccggtgaccgggaaaattggtcgaacg
aacgtcaccaaggggaatgtcgtaagccccgaaagcgggcctttgacgatcatcgtcagt
caggaccccatgtacgttacgttccccgtcagtcaacgcgaatttctgcgtttgcagcaa
acgggacaacagctcgacgtcacccagttgaaagcaagtttgcggttcgccgacctcagc
aagtacgaccaggagggtacagtcaattttgtcgacgttacggtcaatcggacgaccgat
accgtactcgttcgtgcctcctttccgaatccgaagggcgcgctcgtcgacgggcagctc
gtccatgtatcgattaaagccggaaagccggtggaaaaagtcgtcatcccgcagtcggcg
ctcatcgcggatcagcaagggacatacgtattcgtcgtggatgaaggaaaagcggctatc
aggagggtaaggaccggcggcgaaagcggaggcaccaatattgtcattgaggaaggcttg
agcggaggagagcaggttattgtcgacggattgcagagcgtgcgccccggcacagctgta
atcgcgacgcccacccctcaactccaagatcggagttga
DBGET
integrated database retrieval system
