KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_40163
Entry
HYPDE_40163       CDS       T02646                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HYPDE_40163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hdt03400]
    HYPDE_40163
Enzymes [BR:hdt01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HYPDE_40163
DNA repair and recombination proteins [BR:hdt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HYPDE_40163
 Prokaryotic type
     HYPDE_40163
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH RecR_HhH
Other DBs
NCBI-ProteinID: AGK59701
UniProt: N0BGY1
LinkDB
Position
complement(3486352..3487113)
AA seq 253 aa
MAKAPKDRSPSSIPSSKPQRKSGKKATPLKKSAAKGGRRSLLTEAEIREVFRRFQAASPE
PKGELQYVNPYTLLIAVVLSAQATDAGVNKATPALFKVADTPAKMVALGEEKLRDYIKTI
GLYRNKAKNVVALSKRLVDEFGGQVPGDRDILETLPGVGRKTANVVMNIAFGHPTMAVDT
HVFRVANRIGLSQGTTPRAVEADLLRVVPPKYALHAHHWLILHGRYVCKARRPECWHCLV
NDICLYPDKTPAP
NT seq 762 nt   +upstreamnt  +downstreamnt
atggccaaagcacccaaggatagaagtccgtcaagcattcccagttccaaaccgcaacgc
aagtcaggaaaaaaggcgacgccgcttaaaaaatcggcagcgaaagggggccgccgctcg
ctgctgacggaggcggaaattcgtgaagttttccgccgttttcaagccgcgagccccgag
cccaagggggagttgcaatacgttaacccctacaccctgctgatcgccgtcgtgctctcg
gcccaggcaaccgatgccggcgtcaacaaggcgacgcccgccctcttcaaggtcgccgat
acgcccgccaagatggtcgcgctcggcgaggaaaagctgcgcgactatatcaagacgatc
gggctctatcgcaataaggccaagaacgtcgtcgcgctgtcgaagcgcctcgtcgacgag
ttcggcggccaggtgccgggcgatcgcgatattctagaaacgctccccggagtcggtcgg
aagacggccaacgtcgtgatgaatattgccttcggccatccgacgatggcagtcgatacg
catgtcttccgcgtcgcgaaccgcatcggtttatcgcaaggaacgacgccgcgtgcggtc
gaagccgacttgcttcgggttgtgccgcccaaatacgcgctgcacgcccaccactggcta
atcctgcacggacgctacgtctgcaaagctcgccggccggaatgctggcattgcctcgtc
aacgacatctgcctctatcccgacaagacacctgcgccttaa

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