Herbiconiux sp. SALV-R1: HL652_06595
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Entry
HL652_06595 CDS
T06594
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea00300
Lysine biosynthesis
hea00550
Peptidoglycan biosynthesis
hea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HL652_06595
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HL652_06595
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hea01011
]
HL652_06595
Enzymes [BR:
hea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HL652_06595
Peptidoglycan biosynthesis and degradation proteins [BR:
hea01011
]
Precursor biosynthesis
Amino acid ligase
HL652_06595
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
YqeC
Motif
Other DBs
NCBI-ProteinID:
QJU53327
UniProt:
A0A6M5IXR2
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Position
1359912..1361498
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AA seq
528 aa
AA seq
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MSDRGSSALRPEHPIARSLPHLVDEFGFETAGAPVSDVVTGITLSSRDVQPGDLYVGLKG
ARHHGAAFAAAAAESGAVAVLTDPEGVDLAVESGLPVLVTPEPRLALGEVAAWIYRTREE
PPTLFGVTGTNGKTSVAYLLEAVLRQLGITAGLSTTAERRIGDETIVSKLTTPEATEIHA
MLARMREADVRSVVLEVSAQAITQHRVDGIVFDVVGFTNLTHDHLDDYQTMELYYEAKRE
LFQPDRARRGVVIVDAEWGGRLAQESRIPLTTISTDPASEAEWHLTVDEERADRTTFTLR
GPDHRELTTSVPLLGAYMAANAALAIVMLVESGFDLDAIAHALNLAHDDDGDEIDDDDFQ
PGIDVYIPGRAERVSGDRGPIVYIDYGHSPDAFTSTLESIRRVTDGRVVMVFGADGDRDP
SKRAEMGAIAARLADAVVITDFHPRSEDPALIRAALIAGAKAAVPDGELYEVADPRAAFR
AALGLAGEGDVILYAGPGHEDYHEVAGERIPYSARDDARKALHEHGWL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgatcggggctcttctgctctccgacccgagcatccgatcgcgcgctcgctgccg
catctcgtcgacgagttcggcttcgagaccgcgggcgcgccggtctccgacgtcgtcacc
ggcatcacgctgtcgtcgcgcgacgtgcagcccggcgacctctacgtcggcctgaagggg
gcgcgccaccacggcgccgccttcgccgccgcggccgccgagtcgggcgccgtcgccgtg
ctcaccgacccggagggtgtcgacctcgccgtggagtcggggctgccggtgctcgtcacg
ccagaaccgcgcctcgccctcggcgaggtcgccgcctggatctaccgcactcgcgaggag
ccgccgaccctgttcggcgtcaccggcacgaacggcaagacgagcgtcgcctacctgctc
gaggccgtgctccgtcagctcggcatcaccgcgggcctcagcaccaccgccgagcgtcgc
atcggcgacgagaccatcgtgtcgaagctcaccacgcccgaggccaccgagatccacgcc
atgctggccaggatgcgcgaggccgacgtgcgctccgtggtgctcgaggtctcggcgcag
gccatcacgcagcaccgggtcgacggcatcgtgttcgacgtggtggggttcaccaacctc
acccacgaccacctcgacgactaccagaccatggagctctactacgaggccaagcgcgag
ctgttccagcccgatcgcgcccgccgcggtgtggtgatcgtcgacgccgagtggggcggc
cggctggcgcaggagtcgcgcatcccgctcaccaccatctcgaccgacccggcctccgag
gcggagtggcacctcaccgtcgacgaggagcgggccgaccgcaccaccttcaccctgcgc
ggccccgaccaccgcgagctcaccaccagcgtgccgctgctcggtgcctacatggcggcc
aacgccgcgctcgccatcgtgatgcttgtcgagtcgggcttcgacctcgacgccatcgcg
cacgccctcaacctggcgcacgacgacgacggcgacgagatcgacgacgacgacttccag
cccggcatcgacgtctacatcccgggccgcgccgagcgcgtctcgggcgaccgcgggccg
atcgtctacatcgactacgggcacagccccgacgccttcacctcgacgctggagtcgatc
aggcgggtcaccgacggccgcgtcgtgatggtgttcggcgccgacggcgaccgcgacccg
tcgaagcgcgccgagatgggcgccatcgctgcccggctggcggatgcggtggtcatcacc
gacttccacccgcgcagcgaagaccctgccctcatccgcgccgccctcatcgccggcgcg
aaggccgccgtgcccgacggcgagctgtacgaggtcgccgacccgcgggccgcgttccgc
gccgccctcggtctcgccggcgagggcgacgtcatcctctacgccggccccggccacgag
gactaccacgaggtcgcgggggagcgcattccctactccgcccgcgacgacgcgcgcaaa
gcgctgcacgaacacggatggctctga
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