Candidatus Hydrogenosomobacter endosymbioticus: HYD_5910
Help
Entry
HYD_5910 CDS
T07863
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYD_5910 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hec03400
]
HYD_5910 (nth)
Enzymes [BR:
hec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYD_5910 (nth)
DNA repair and recombination proteins [BR:
hec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYD_5910 (nth)
Prokaryotic type
HYD_5910 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BDB96458
LinkDB
All DBs
Position
complement(679543..680187)
Genome browser
AA seq
214 aa
AA seq
DB search
MAEIRKVFEYFENKYPDPKTTLYYTNAFTLLISAILSAQAMDRVVNTVVPGLFEIADSPE
KMLTLGEQRLIEHIRKIGLYRTKAKNIALLSSILIEKFSSIVPDTIDELISLPGVGRKTA
NIVLNEFFGQPTIPVDTHVFRVAQRIGIARAKTPEQLEKELLNKIPNPWKKNSHFWIVLH
GREVCTARNPNCSICKLKRVCASIRTQNNYKRNS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaattagaaaagtgtttgaatattttgaaaacaaatatccagatccgaaaact
accttatactatacaaatgcttttaccctgcttataagcgccatcctctctgcgcaggca
atggatcgggttgtaaatacagtcgtaccaggcctgttcgaaatcgcagactccccagaa
aaaatgctcacgctcggagaacaaagactaatcgagcacatcagaaaaataggcctctat
agaacaaaagcaaaaaacatagcgctcttaagcagcattcttatagaaaaattttcttct
attgttccagatactatagatgagctaatttctctccctggagtaggaagaaaaacagcc
aacatagtcttgaatgaattttttggccagccaacaataccggtagatacccacgtcttt
agggtggctcaaagaataggcattgcaagagcaaaaactccagaacaactcgaaaaagaa
ctcctcaataaaatccccaatccctggaaaaaaaattcgcatttctggattgtgcttcat
ggaagagaggtgtgtacagctcgaaacccaaactgttctatctgcaaactaaagagggtc
tgcgcctcgatcagaacgcagaataattacaaaaggaactcataa
DBGET
integrated database retrieval system
