Herbaspirillum sp. meg3: hmeg3_00950
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Entry
hmeg3_00950 CDS
T05024
Name
(GenBank) RND transporter
KO
K18903
outer membrane protein, multidrug efflux system
Organism
hee
Herbaspirillum sp. meg3
Module
hee_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_00950
01504 Antimicrobial resistance genes [BR:
hee01504
]
hmeg3_00950
Transporters [BR:
hee02000
]
Other transporters
Pores ion channels [TC:
1
]
hmeg3_00950
Antimicrobial resistance genes [BR:
hee01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
hmeg3_00950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_11
Motif
Other DBs
NCBI-ProteinID:
ASU41179
UniProt:
A0A223PGG8
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All DBs
Position
207438..208886
Genome browser
AA seq
482 aa
AA seq
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MRLHPIAAASVIAVMLSATMLAGCAVGPDYRKPDVDMPVTWQLDAPWRQGTPSDTHAKGA
WWERFGDAKLNALQEQALSGNQTLAFAAARLTQARATANSVSAGMYPQVSTGVRASRLRI
AGNRPLTNYNSPNFATVQNDFALGLNTSYEVDLFGRVQRNVEGARASAEQSAADLENTRL
LLSADLATNYFNLRELDVELDVLSRSIELQRKALELATSRHDLGATSGLDVAQQQALLDT
TLTQVDVLRKARSQYEHAIATLTGTPAPNFSLPPAMAPMTPPAVPIGIPSDLLERRPDIA
SAERAMAASNAQIGVARAAFFPSVMLAPSYGVDSRNIETLFNAPSVVWSLGVSLTQTLFD
GGRISANVDFAKGGYEAAVANYRRIVLTAMQEVEDGITGVSALDRAYAQAQAAIVSARRV
LDIANSRYEGGVATYLDVITAQQSLLNSERQAAQLMGQRMLTSVFLIKALGGDWPDAKLA
QK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcctgcatccgattgctgcggcctctgtcattgccgttatgctgagcgccaccatg
ttggcgggctgcgcagtgggccctgattaccgcaagcctgacgtcgacatgccggtcacc
tggcaactcgatgcgccgtggcgtcagggtacgccgagcgacacgcacgccaagggcgcg
tggtgggaacgtttcggcgacgccaaactgaacgccttgcaggaacaggcgctttccggc
aaccagacgctggcgtttgccgctgcgcggctgacgcaggcacgcgctaccgccaattcg
gtttcggccggcatgtatccgcaagtgagcaccggcgtgcgcgcctcgcgtttgcgcatc
gccggcaaccggccgctgaccaactacaactcgcccaacttcgccacggtgcagaatgat
tttgcgttggggctcaataccagctacgaggtcgatctgttcggccgcgtgcagcgcaat
gtcgaaggtgcccgtgcctccgccgagcaatccgccgcggatctggaaaacacgcgcctg
ctgctgagtgccgatctggcgaccaattacttcaacctgcgtgaactggacgtggaactc
gacgtgctgtcgcgttccattgagttgcaacgcaaggcgctggaattggcgacctcgcgc
catgatctcggcgccacttccggtctggatgtcgctcagcaacaagccctgctcgacacc
acgctgacgcaagtggatgtgctgcgcaaggcgcgctcgcaatatgaacatgccatcgcg
acgctgaccggcactcctgcacccaacttctccttgccgcctgcaatggcgccgatgaca
ccgcctgcagtaccgatcggcataccatccgatttgttggaacgccgtcccgatatcgct
tctgcagagcgcgccatggccgcttccaatgcgcaaatcggcgtggcccgtgcagcgttt
ttcccaagtgtgatgctggcgccatcgtacggcgtcgacagccgtaacatcgagaccttg
ttcaatgccccgagcgtggtgtggtcgttgggagtgtcgctgacgcagaccctgttcgat
ggcggtcgtatcagcgccaacgtcgatttcgccaagggcggttatgaagccgctgtcgcc
aactaccgccgcatcgtgttgaccgcgatgcaggaagtggaagacggcatcaccggtgtc
tcggcattggatcgcgcttatgcgcaggcgcaggctgcgatcgtctcggcgcgtcgtgta
ctggacatcgccaacagccgttatgaaggtggtgtggcgacctacctcgatgtgatcacc
gcgcagcagtcgctgctcaacagcgaacgccaggcggcgcagctgatggggcagcgcatg
ctgacgtcggtgtttctgatcaaggccttgggtggcgattggcccgatgcgaagcttgca
caaaaatga
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