Herbaspirillum sp. meg3: hmeg3_21130
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Entry
hmeg3_21130 CDS
T05024
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee01501
beta-Lactam resistance
hee01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
hmeg3_21130
01503 Cationic antimicrobial peptide (CAMP) resistance
hmeg3_21130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_21130
01504 Antimicrobial resistance genes [BR:
hee01504
]
hmeg3_21130
Transporters [BR:
hee02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
hmeg3_21130
Antimicrobial resistance genes [BR:
hee01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
hmeg3_21130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
ASU40555
UniProt:
A0A223PEM0
LinkDB
All DBs
Position
4689973..4693119
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AA seq
1048 aa
AA seq
DB search
MGKFFIDRPVFAWVLAIFIILAGALAITGLPVSQYPSIAPPTIVVTATYPGATAQTLDDS
VTSLIEQEMNGADGLQYMESQSQANGQVQITVTFSPETNADLAAVDVQNRLKRVEARLPA
AVTQQGVQVTKSRSNFLLFIGLSSTDGKLDPVALGDYLSRNVLNEVKRVPGVGQAQLFGT
ERAMRIWIDPNKLIGLNLTPADVTAAITAQNALVAGGTLGALPSPTSQQISATVVVNGQL
TSPEQFGNIVLRANADGSSVRMRDVARIEVGGQSYDTSGRLDGKPSSFIGVQLSPTANAL
GTATAVHKKMEELAKYFPAGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFLQ
NIRYTIIPTIVVPVALMGTFATLLVFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM
SEEGLSPKEATRKAMGQITGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMVF
SVLMAFTLTPALCATILLPVEKGHHHEKGGFFGWFNRRFNKTASGYQGFIGKMLTKTGRY
MIVYAVILGCVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTGRTLEVIKTIENYYLKQ
PAVEHVVAIAGFSFSGNGQNAGLVFTPLKDWSERDKTQSADAVAGRAFGAFSQIKDAIVF
PLNPPPIPELGNATGFTFRLQDRAGLGHAALVQARNQILGMASQSKVLAGVRPEGLEDAP
QLQLDIDRDKANALGVPFSTINSVLSTALGSSYVNDFPNQGRQQRVIVQADAKRRLQPED
LAGLYARNSGGTMVPFSAFTTSKWINGPVQLIRYNGYPAMKIAGGAAPGRSTGEAMSEME
GFVAKLPPGFGFEWTGQSLEEKTSGSQAPALYALSLVAVFLVLAALYESTSIPLAVMLVV
PLGILGALLGVTIRGMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGMGLIEATLE
AVHLRFRPIIMTSLAFILGVLPLVIASGAGSASQRAIGTGVMGGMITATVLAVFLVPIFF
VVVRKIFKGSQAKPDAAHHNIDVEDKNV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagttctttattgatcgccccgtttttgcgtgggtgttagcaatcttcatcata
ctggcgggcgcgctggccattaccggcctgcccgtctcccagtatccgagcattgcgccg
ccgaccatcgtggtcacggcgacgtatccgggcgcgaccgcgcaaaccctcgacgattcg
gtgaccagcctgatcgaacaggaaatgaacggcgccgacggcttgcaatacatggagtcg
caaagccaggccaacggccaggtgcaaatcacggtgaccttctcgccggaaaccaacgcc
gatctggctgcggtggacgtgcagaaccgtctgaagcgcgtggaagcacgtctgccggcg
gctgtgacgcaacaaggtgtgcaagtcaccaagtcgcgcagcaacttcctgctgtttatc
ggcttgtcgtcgaccgacggcaaacttgatccggtggcgctgggcgactatctgtcgcgt
aacgtcctcaatgaagtcaaacgcgttcctggtgttggtcaggcgcagttgttcggtacc
gaacgcgcgatgcgcatctggatcgatccgaacaaactgatcggtctgaacctgacaccg
gccgacgtcactgcagccatcaccgcacaaaatgcgctggtcgccggcggtacgctgggc
gcgttgccaagcccgacatcacagcaaatttctgcaactgtggtggtgaacggccagctg
accagcccggaacagttcggcaacatcgtcctgcgtgccaatgccgacggttcgtcggta
cgcatgcgtgacgtcgcccgtatcgaagtcggcggacagtcgtatgacacctccggccgc
ctcgacggcaagccaagctcgttcatcggtgtgcagttgtcgccgaccgcgaacgcgctg
ggcacagcaaccgccgtgcacaagaagatggaagagctggccaagtatttcccggccggt
gtgaagtacaccatcccttacgacacctccaagttcgtcaagatctcgatcgaagaagtg
gtcaagaccctgatcgaagcgatcgtgctggtgttcctggtgatgttcctgttcctgcaa
aacatccgctacaccatcattccgaccatcgtcgtgccggtggcgctgatgggcaccttc
gcaacgctgctggtgttcggtttctccatcaacgtgctgaccatgtttggtatggtgctg
gcgatcggtattctggtcgatgatgcgatcgtggtggtggaaaacgttgaacgcatcatg
agcgaagagggtctttcgcccaaggaagcaacccgcaaggcgatgggccagatcaccggc
gcgctgatcggtatcacactggtgctgattgcggtgttcatcccgatggcattcttcggt
ggtgcggttggcgcgatttatcgccagttctcgctgtcgatggtggcgtcgatggtgttc
tcggtattgatggcgttcacgctgacaccagcattgtgcgcaaccattctgctgccggtt
gaaaagggccatcatcacgaaaaaggcggcttcttcggttggttcaatcgccgtttcaac
aagactgcttccggttatcagggcttcatcggcaagatgctgaccaagaccggccgttac
atgatcgtgtatgccgtcatcctcggctgcgtgggcttgctgtatgtacgcctgccggct
tcgttcctgccgaacgaagatcagggctacatcatcaccaacgtgcagttgccgccaggc
gccagcaccggacggacgctggaagtgatcaagaccatcgaaaactattacctcaagcaa
cctgcggtcgaacacgttgtggcgattgccggtttcagcttctcgggtaacggtcagaat
gcaggtctggtgttcacaccgctgaaggactggagcgaacgcgacaagacgcaatcggct
gacgccgttgcaggccgtgctttcggtgccttctcgcagatcaaggatgcgatcgtgttc
ccgctgaacccgccgcctattcctgaactgggtaacgccaccggcttcaccttccgtctg
caggaccgtgccggtctgggacacgctgcgctggtacaggcacgtaatcagatcctcggt
atggcttcgcaaagcaaggtgttggcaggcgtccgccctgaaggtctggaagatgcgcca
cagctgcaactggacatcgaccgcgacaaggcaaacgcattgggcgtgccgttctcgacc
atcaacagcgtgctgtcgacggcattgggttcgtcctacgtcaatgacttcccgaatcag
ggtcgtcaacaacgcgtgatcgtccaggccgacgctaagcgtcgtctgcaaccggaagat
ctggccggcctgtatgcccgcaatagcggtggaaccatggtgccgttctcggccttcacg
acctcgaagtggatcaacggccctgtgcagctgattcgctacaacggctatccggcaatg
aagatcgccggcggtgcagcacctggccgcagtaccggtgaagcgatgtcggaaatggaa
ggcttcgtcgccaagctgcctcctggcttcggtttcgaatggaccggccagtcgctggaa
gaaaagacctccggttcgcaagcgcctgcactgtatgcgctgtcgctggtcgccgtgttc
ctggtgctggctgcgctgtacgaaagcacctcgatcccgctggccgtgatgctggtggtg
ccgctgggtattctcggcgcactgctgggcgtaacgatccgcggcatgcctaacgacgtg
tacttcaaggtcgggatgattgcggtggtgggtctgtcggcgaagaacgcgattctgatc
atcgagttcgccaaagacttgcaagcgcaaggcatgggcctgatcgaagcgacgctggaa
gcggttcacttgcgcttccgtccgatcattatgacctcgctggcgttcatcctcggcgtg
ctgccactggttatcgccagcggtgcaggttccgccagccaacgcgccatcggtaccggc
gtgatgggcgggatgatcacggcgaccgtgctggccgtgttcctggtcccgatcttcttc
gtcgtcgtgcgcaagatcttcaaaggcagccaagccaagccggacgctgcccatcacaat
atcgatgtggaggataagaatgtttaa
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