Helicobacter pylori F16: HPF16_0774
Help
Entry
HPF16_0774 CDS
T01910
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hef
Helicobacter pylori F16
Pathway
hef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF16_0774 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hef03400
]
HPF16_0774 (nth)
Enzymes [BR:
hef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HPF16_0774 (nth)
DNA repair and recombination proteins [BR:
hef03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPF16_0774 (nth)
Prokaryotic type
HPF16_0774 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
IZUMO
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BAJ55371
LinkDB
All DBs
Position
803464..804114
Genome browser
AA seq
216 aa
AA seq
DB search
MGLKRAKTYQKAQQIKELLLKHYPNQTTELHHKNPYELLVATILSAQCTDARVNKITPKL
FEKYPGVNDLALASLEEVKEIIKSVSYFNNKSKHLISMAQKVVRDFKGVIPSTQKELMSL
DGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSDANTPIKTEKELSDLFKDNLSKL
HHALILFGRYTCKAKNPLCGECFLKEFCVSKASFKA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaaacgcgctaaaacttaccaaaaagcccaacaaatcaaagaactgctttta
aaacattaccccaaccaaaccaccgaattgcaccataaaaacccctatgaattgctggtg
gctaccattttaagcgctcaatgcacggacgctagagtgaataaaataacgcccaagtta
tttgaaaaatacccaggcgtgaatgatttagcactcgcttctttagaagaagttaaagaa
atcattaaatccgtttcttatttcaacaataaaagcaagcatttaatcagtatggcgcaa
aaagtggttagggattttaagggcgttatcccctctacgcaaaaagaattgatgagccta
gatggcgtggggcaaaaaaccgctaatgtggtgctttcagtgtgctttgatgcaaattat
atagccgtagatacccatgtattccgcacgacgcaccgcttaggtttaagcgacgctaac
acgcccattaaaaccgaaaaagaactcagcgatcttttcaaagacaacctatccaaactc
caccatgccttaatcttgtttggccgctacacctgcaaggctaaaaaccccttatgcggt
gagtgttttttaaaagaattttgcgtttctaaggctagctttaaagcgtag
DBGET
integrated database retrieval system
