Halomonas elongata: HELO_1353
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Entry
HELO_1353 CDS
T01311
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
hel
Halomonas elongata
Pathway
hel00270
Cysteine and methionine metabolism
hel00450
Selenocompound metabolism
hel01100
Metabolic pathways
hel01110
Biosynthesis of secondary metabolites
hel01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HELO_1353 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HELO_1353 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hel01007
]
HELO_1353 (patB)
Enzymes [BR:
hel01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
HELO_1353 (patB)
Amino acid related enzymes [BR:
hel01007
]
Aminotransferase (transaminase)
Class II
HELO_1353 (patB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
PreAtp-grasp
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CBV41236
UniProt:
E1V5X4
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All DBs
Position
409326..410507
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AA seq
393 aa
AA seq
DB search
MTSTFDFATPIDRRHPSDGDWPSQKWHRFDADVLPLWVADMDFRSPPAVIEALRARVDHG
VYGYGLVPSSLRETLCEWSAEHYGWSIEPDWQLWLPGVVPALHMASLALTEPGDGVLTVT
PIYPPFLQVARRTGRESQQAAMRPPETPDGDWRLDLEALEAAITPRTRLLLWCHPHNPTG
RVWSAAELEGLAALVERHDLLVVSDELHCDLLLDDGARHRPLAAMFPALAERTLTLWAPS
KTFNLAGLTTACAVIPDAGLRRRFAEQAKGLQPDGNVLGLVAAEAAYRHGEPWRQALLET
LRGHRRRLAERVASWPGVRMAAPQSTYLAWLDLREAPALQDADSPQQALLERAGVALSDG
ADFGWPGFARLNFGTTAEQLEAALERMDTLLKS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacattcgattttgccacgcccatcgatcggcgacatcccagcgatggcgac
tggccgtcgcagaagtggcaccgcttcgacgctgacgtgctgccgttatgggtggccgac
atggactttcgttctccgccggcggtgatcgaggcgctgcgggcccgggtcgatcatggc
gtctatggctatggcctggtaccgagcagcctgcgcgagacgctgtgcgaatggagcgcc
gaacattacggctggtccatcgagcccgactggcaactatggctgccgggcgtggtaccg
gccctgcacatggccagcctggcgcttaccgagcccggtgacggcgtgctcacggtgacg
ccgatctatccacctttcctgcaggtggcgcggcgcaccggccgcgagtcccagcaggcc
gccatgcggccacccgagacgcccgacggtgactggcggctcgatctcgaggccctggag
gcggccatcacaccgcgtacccggttgctgctgtggtgccatccccacaaccccaccgga
cgcgtctggagcgccgccgaactggaagggctggcggcactggtcgaacgtcacgacctg
ctggtcgtctccgacgagctgcattgcgacctgctgctcgacgacggcgcccggcatcgc
ccgctggcggcgatgttcccggcgcttgccgagcgcaccctgacgctctgggcgccttcc
aagaccttcaacctggcggggctgaccacggcctgtgcggtgattcccgacgccggcctg
cgccggcgcttcgccgagcaggccaaggggctccagcccgacggcaatgtgctgggcctg
gtggccgccgaggccgcctatcgccatggcgagccctggcggcaggcgctgctcgagacc
ctgcgcggccatcgtcgccggctggcggaacgcgtcgcgagctggcccggtgtgaggatg
gccgcaccgcagtcgacctatctggcctggctggacctgcgcgaggccccggcgctgcag
gacgccgactcgccccagcaagccctgctggagcgcgccggcgtggccctctcggatggc
gccgacttcggctggcccggcttcgcccggctcaacttcggcaccaccgccgagcagttg
gaagcggcgctggagcgcatggacacgctattgaaaagctga
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