Herbaspirillum sp. DW155: HBDW_02960
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Entry
HBDW_02960 CDS
T10195
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00300
Lysine biosynthesis
hew00550
Peptidoglycan biosynthesis
hew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBDW_02960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBDW_02960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hew01011
]
HBDW_02960
Enzymes [BR:
hew01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HBDW_02960
Peptidoglycan biosynthesis and degradation proteins [BR:
hew01011
]
Precursor biosynthesis
Amino acid ligase
HBDW_02960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BEV13508
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Position
337063..338589
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AA seq
508 aa
AA seq
DB search
MSERVLSLQDIFAWLRQAAPSAQLTSDSRRVAPGDVFFAYVGDADGRSYIADAVERGAAA
VLYEADGYTWPDQIEEPHLAVPDLKARAGEIAAAWYGQPDQNMLTVAVTGTNGKTSCAYW
LGTALSRLPGASAAGVIGTLGVGTFINGKPQGFDVTGYTTPDAVLLQRSLSKLSQARVGA
LAIEASSIGLAQGRMNGMHVDVALLTNFTRDHLDFHGDMQTYEEAKRKLFQWPGLKHAVV
NLDDGMGQRLLPLLAERKLPVIGYAIADGLGGDTQGVPTLRATQLRSSHTGTTFHVDSPF
GSGQVKTQLVGRFNVSNVLGIMGVLLTQGVAWDAVVAAAAALTPAPGRMQQFGGPDVPLI
VIDYAHTPDALDKTLSTLRQVATQRGGQLWCVFGCGGDRDPGKRPQMGQIAEQADQVVLT
SDNPRTEDPQVIIDQIRAGMSRVEPTVLPDRAGAILWAIRHATKSDVVLLAGKGHEPYQE
IAGKKLPFLDADHVALALAARSTMMGGA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcgcgttctgagccttcaagacatcttcgcctggctgcgccaggcggcgccg
tctgcgcagctgacctcggattcccgccgcgtggcgccgggcgacgtgttcttcgcctac
gtgggcgacgccgatggccgctcctatattgccgatgccgtcgagcgcggcgccgccgcc
gtgctgtatgaagccgatggctatacctggcccgaccagatcgaagagccgcacctggcc
gtgcccgatctcaaggcccgtgccggcgagatcgccgccgcctggtacggccagcctgac
cagaacatgctgacggtggccgtcaccggcaccaatggcaagacctcctgcgcctactgg
ctgggcacggcgctctcgcgcctgcccggtgccagcgctgccggcgtgatcggcaccctg
ggcgtgggtaccttcatcaacggcaagccgcaaggtttcgacgtcaccggctataccacg
ccggacgccgtgctgctgcaacgcagcctgtccaagctgtcgcaggcccgcgtgggggcg
ctggccatcgaggcctcgtccatcgggctggcccagggacgcatgaatggcatgcacgtc
gacgtcgccctgctgaccaatttcacccgcgatcacctggatttccacggtgacatgcag
acctatgaagaggccaagcgcaagctcttccagtggcccggcctcaagcacgccgtggtc
aacctggacgatggcatgggccagcgcctgctgccgctgctggccgagcgcaagctgccg
gtgatcggctacgccattgccgacgggctgggtggcgacacgcaaggcgtacccaccctg
cgcgcgacccaactgcgcagcagccataccggtaccactttccatgtggactcgcccttc
ggcagcggccaggtcaagactcagctggtcggccgcttcaacgtcagcaacgtgctgggc
atcatgggtgtgctgcttactcaaggcgtggcctgggatgcggtggtggccgccgctgcc
gcactgaccccggcccctggccgcatgcagcaattcggcggccccgatgtgccgctgatc
gtgattgattacgcccatacccccgacgcgctcgacaagaccctctccaccctgcgccag
gtcgctacccagcgcggtggccagctgtggtgcgtgtttggctgcggcggtgaccgcgat
ccgggcaagcgcccgcagatgggccagatcgccgagcaggccgatcaggtcgtgctgacc
agcgacaacccgcgcaccgaagatccgcaagtcatcatcgaccagatccgtgccggcatg
agccgcgtcgagccgaccgtgctgcctgatcgcgccggtgccatcctgtgggcgatccgc
catgccaccaagtccgacgtggtgctgctggccggcaagggccatgagccttatcaggaa
atcgccggcaagaaattgcccttcctcgatgccgatcatgtcgcgctggccctggccgcg
cgctcgaccatgatgggaggcgcatga
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