Herbaspirillum sp. DW155: HBDW_03080
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Entry
HBDW_03080 CDS
T10195
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00540
Lipopolysaccharide biosynthesis
hew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HBDW_03080 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hew01005
]
HBDW_03080 (lpxC)
Enzymes [BR:
hew01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HBDW_03080 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
hew01005
]
Lipid A
HBDW_03080 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BEV13520
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All DBs
Position
352639..353571
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AA seq
310 aa
AA seq
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MKQRTIKNLVKTTGVGLHSGTKVELTLRPAAPDTGILFRRVDLDPVVELPMIATGVGDTR
MASTLTKDGAKVSTVEHLLSACAGLGIDNLVIDLTAEEIPIMDGSASSFVFLLQQAGLQE
QNAPKKFIRVLKPVEVREGTGDKEKWARLEPYDGFRLKFFIEFNHPAVDGTGQVAEVDFG
IDSYVKEIARARTFGFMQDVETLRGMGLARGGSFENAIVMDEYRILNADGLRYDNEFVRH
KILDAIGDLYIIGHPLLASYDAHKSGHGLNNLLLRELLSQPDAYEIVSFDQLEQAPQTYV
MQAQQEWALN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagcgcacaatcaagaatctggtcaagaccacaggggtcggcctgcactccggc
accaaggtcgagctgaccctgcgtccggccgcacccgataccggcatcctgttccgccgc
gtggatctcgatcccgtggtcgagctgccgatgatcgccaccggcgtgggtgatacccgc
atggcctcgaccctgaccaaggatggcgccaaggtctccaccgtcgagcacctgctgtcg
gcctgcgccggcctgggcatcgacaatctggtcattgatctgaccgcagaagaaattccc
atcatggacggctcggcctcgtcgttcgtcttcctgctgcagcaggccggcctgcaggag
cagaacgcaccgaagaaattcatccgcgtcctgaagccggtggaagtgcgcgaaggcacc
ggcgacaaggaaaaatgggcccgcctggaaccgtatgatggcttccgcctgaagttcttc
atcgaattcaaccacccggccgtggacggtaccgggcaagtggccgaggtcgatttcggc
atcgactcctacgtcaaggaaatcgcccgcgcgcgtaccttcggcttcatgcaggatgtg
gaaaccctgcgcggcatgggcctggcccgtggtggttccttcgagaacgccatcgtcatg
gatgaataccgcatcctcaatgccgatggcctgcgctatgacaacgagttcgtgcgccac
aagatcctggatgccatcggcgacctctacatcatcggccatccgctcctggccagctac
gacgcccacaagtccggtcatggactgaacaacctgctgctgcgtgaattgctgtcgcag
ccggatgcctacgaaatcgtcagcttcgaccagctagaacaggcaccgcagacctatgtg
atgcaagcccagcaggagtgggcgctgaactga
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