Herbaspirillum sp. DW155: HBDW_22360
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Entry
HBDW_22360 CDS
T10195
Symbol
acnD
Name
(GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD
KO
K20455
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:
4.2.1.117
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00640
Propanoate metabolism
hew01100
Metabolic pathways
hew01120
Microbial metabolism in diverse environments
hew01200
Carbon metabolism
Module
hew_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HBDW_22360 (acnD)
Enzymes [BR:
hew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.117 2-methylcitrate dehydratase (2-methyl-trans-aconitate-forming)
HBDW_22360 (acnD)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
BEV15448
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All DBs
Position
complement(2461678..2464299)
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AA seq
873 aa
AA seq
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MNTQYRKQLPGTRLDYFDARAAVEAIRPGAWDTLPYTSRVLAENLVRRCDPATLTDSLRQ
LIERKRELDFPWFPARVVCHDILGQTALVDLAGLRDAIADMGGDPAKVNPVVPVQLIVDH
SLAVECGGDDPQAFEKNRAIEDRRNEDRFHFIDWTKLAFENVDVIPPGNGIMHQINLEKM
SPVIHAKDGVAFPDTLVGTDSHTPHVDALGVIAIGVGGLEAENVMLGRASWMRLPDIIGV
ELSGRRQPGITATDIVLSLTEFLRKQKVVGAYLEFYGDGAASLTLGDRATISNMAPEYGA
TAAMFSIDQQTIDYLKLTGRDDEQVKLVETYAKEAGLWSDTLAKVEYERVLRFDLSTVVR
TLAGPSNPHKRLPVSELAAQGIAGKVENEPGKMPDGAVIIAAITSCTNTSNPRNVIAAGL
LARNANRLGLARKPWVKSSLAPGSKAVELYLEEAGLTADLEKLGFGIVAFACTTCNGMSG
ALDPRIQQEIIDRDLYSTAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDIE
QDVLGVTAEGREIRLKDIWPSDEEIDAVVATAVKPQQFRNVYTPMFAARVDRSQAVSPLY
DWRPHSTYIRRPPYWEGALAGERTLSGMRALAVLGDNITTDHLSPSNAILLDSAAGEYLA
KMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKKADGSVQQGSLARLEPEGKVMR
MWETIETYMERKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGM
GVLPLEFKPGENRNTYAIDGTETYDVIGERRPRADLTLVIHRSNGERVEVPVTCRLDTAE
EVSIYEAGGVLQRFAQDFLEASANAGQNAKEQA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaataccgcaagcaactgcccggcacccgactggattatttcgatgcccgc
gccgccgtggaagcgatccgtcccggcgcctgggacaccctgccctacacctcccgcgtg
ctggcagaaaacctggtgcgccgctgtgatcctgccaccctcaccgattcgctgcgccag
ctgatcgaacgcaagcgcgagctggatttcccgtggttcccggcgcgcgtggtgtgccac
gacatccttggacagaccgcgctggtggacctggccggcttgcgcgacgcgattgccgac
atgggcggcgacccggccaaggtcaatccggtggtgccggtgcaactgatcgtggaccac
tcgctggcggtggaatgtggcggcgatgatccgcaggcctttgaaaagaatcgtgccatc
gaagaccgccgcaatgaagatcgcttccacttcatcgactggaccaagctggccttcgag
aacgtggacgtgatcccccccggcaacggcatcatgcaccagatcaatctggagaagatg
tcgccggtgatccatgccaaggatggcgtggccttccccgacaccctggtcggcaccgac
agccacaccccgcacgtggacgcgctgggcgtgatcgccatcggcgtgggcggcctggaa
gccgaaaacgtcatgctgggccgcgcctcctggatgcgcctgcccgacatcatcggggtg
gaactgagcggccgccgccagccgggcatcactgccaccgacatcgtgctctcgctgacc
gaattcctgcgcaagcagaaggtggtgggcgcttatctggagttctacggcgacggtgct
gccagcctgaccctgggcgaccgcgccaccatttccaacatggccccggaatatggcgcg
accgccgccatgttctccatcgaccagcagaccatcgattacctgaagctgaccggccgt
gacgatgaacaggtcaagctggtggaaacctatgccaaggaagccggcctctggtccgac
acgctagccaaggtcgagtacgagcgcgtgctgcgctttgacctctccaccgtggtgcgt
accctggccgggccgagcaatccgcacaagcgcctgccggtgtccgagctggccgcgcaa
ggcattgccggcaaggtcgagaacgaaccgggcaagatgcctgatggcgccgtcatcatc
gccgccatcaccagctgcaccaataccagcaacccgcgcaacgtgatcgccgccggtttg
ctggcgcgcaatgccaatcgtctcggcctggcgcgcaagccttgggtgaagagttcgctg
gcgcccggttccaaggcggttgaactgtatctggaagaagccggcctgaccgccgacctg
gagaaactgggctttggtatcgtggcgtttgcctgcacgacctgcaatggcatgtcgggt
gcgctcgatcccaggatccagcaggaaatcatcgaccgcgacctctacagcactgccgtg
ctgtccggcaaccgcaacttcgatggccgcatccatccttacgccaagcaggccttcctg
gcttcgccaccgctggtggtggcctatgccatcgccggcaccatccgcttcgacatcgaa
caggacgtgctgggcgtcaccgccgagggccgcgaaatccgcttgaaggacatctggccc
agcgatgaagaaatcgacgccgtggtggcgaccgccgtcaagccgcagcagttccgcaat
gtctacacgccgatgttcgccgcccgggtcgatcgcagccaagcggtcagcccgctgtat
gactggcgcccccatagcacctacatccgccgcccgccgtactgggaaggcgcgctggcc
ggtgagcgtacgctctcgggcatgcgggcgctggcggtgctgggcgacaacatcaccacc
gaccacctttcgccctccaacgccatcctgctcgacagcgccgccggcgaatacctggcc
aagatgggcttgccggaagaagacttcaattcctacgccacccaccgcggcgaccacctc
actgcgcagcgcgccacctttgccaaccccaagctgttcaacgagatggtgaagaaagcc
gacggcagcgtgcagcaaggttcactggcgcgcctggaaccggaaggcaaagtcatgcgc
atgtgggaaaccatcgaaacctacatggagcgcaaacagcccctgatcatcatcgccggg
gccgactacggccagggctcgtcccgtgactgggccgccaagggcgtgcgcctggccggg
gtggaagccatcgtggccgagggcttcgagcgcatccaccgcaccaacctgatcggcatg
ggcgtgctgccgctggaattcaaacccggcgagaaccgcaacacctatgccatcgacggc
accgagacctatgacgtcatcggcgaacgccgtccgcgtgcggacctgacgctggtcatc
catcgcagcaacggcgagcgtgtggaagtgccggtgacctgccgcctcgataccgccgaa
gaagtctcgatctacgaagccggtggcgtgctgcagcgcttcgcccaggatttcctggaa
gcctccgccaacgccggccagaatgccaaggaacaagcatga
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