Herbaspirillum sp. DW155: HBDW_44930
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Entry
HBDW_44930 CDS
T10195
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00270
Cysteine and methionine metabolism
hew00450
Selenocompound metabolism
hew00670
One carbon pool by folate
hew01100
Metabolic pathways
hew01110
Biosynthesis of secondary metabolites
hew01230
Biosynthesis of amino acids
hew04980
Cobalamin transport and metabolism
hew04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HBDW_44930 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HBDW_44930 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HBDW_44930 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HBDW_44930 (metH)
04980 Cobalamin transport and metabolism
HBDW_44930 (metH)
Enzymes [BR:
hew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HBDW_44930 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
BEV17705
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Position
complement(4967952..4971695)
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AA seq
1247 aa
AA seq
DB search
MKPNELCQTELLLRDLMSQRILILDGAMGTMIQRYKLTEEDYRGQRFADFSVPGKELFVK
GNNELLSLTQPHIIQEIHEQYLAAGADLIETNTFGATSVAQDDYHMAHLVYEMNVESARL
ARAACDKYSTPDKPRFVAGALGPTPKTASISPDVNDPAARNVTFDQLVAAYLEQTRALVE
GGADVLLVETIFDTLNCKAALFAIDTFFEESGKRLPIMISGTVTDASGRILSGQTVTAFW
NSIRHARPLTVGLNCALGAALMRPYAEELSKIADTFVCIYPNAGLPNPMSDTGFDETPDV
TSALLKEFAESGFVNVAGGCCGTTPPHIKAIAETVATIPPRKVPEPTHEMRLSGLEPFTI
NDDSLYVNVGERTNVTGSKAFARLILNEQYDEALAVARQQVENGAQIIDINMDEAMLDSV
AAMTRFLNLIASEPDIARVPIMIDSSKWEVIEAGLKCVQGKSIVNSISMKEGEEKFLREA
KLCRRYGAAVIVMAFDEVGQADTFARKIEICERAYRLLVDKLDFPPEDIIFDPNIFAVAT
GIEEHNNYAVDFIEATRWIHQNLPYAKISGGVSNVSFSFRGNDPAREAIHTVFLYHAIKA
GMTMGIVNAGMIGVYDDLPAELRERVEDVVLNRREDATERMIEYAATLKAGDKKEEATLE
WRNLPVAKRLSHALVHGITQWIVEDTEEVRQQIAADGGRPIHVIEGPLMDGMNVVGDLFG
QGKMFLPQVVKSARVMKQAVAHLIPFIEEEKRQLEIATGEVAKPKGKIVIATVKGDVHDI
GKNIVTVVLQCNNFEVVNMGVMVPCAEILAKAKEEKADIIGLSGLITPSLEEMAYVAKEM
QRDPYFAGLKMPLMIGGATTSRAHTAVKIAPNYEGPVVYVPDASRAVSVAQSLLADEQKT
QYVAELNADYERIREQHASKKAAPMLSLAAARANKTKLDFAPVRPKFIGRRLFKNVDLGL
LANYIDWGPFFQTWDLAGPYPAILTDEVVGEAATKVFQEAQAMLKKIIDGRWLTANGVIS
LLPANTVNDDDIEIYTDDSRSQVAFTYYGLRQQTEKPVVDGVARPNQCLSDFIAPKDSGV
QDYIGMFAVTAGLGIEKYEKRFEDAHDDYSSIMLKALADRLAEAFAEYLHERVRKDLWGY
AADENLSSTDLIKEKYLGIRPAPGYPACPEHTVKADAFRVMQCDEIGMQLTESYAMFPGA
SVSGFYFAHPQSKYFVVGKIGEDQVADMAERRHVPREEVERWLAPNL
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaacgaactgtgccagaccgaattgctgctgcgcgacctgatgtcgcagcgc
atcctcatcctcgatggcgccatgggcaccatgatccagcgctacaagctgactgaagag
gattatcgcggccagcgtttcgccgacttcagcgttcccggcaaggagctcttcgtcaag
ggcaacaatgaactgctctcgctgacccagccgcacatcatccaggaaatccacgagcaa
tacctggccgccggtgccgacctgatcgagaccaataccttcggcgccaccagtgtggcc
caggacgattaccacatggcgcacctggtctacgagatgaacgtggaatcggcgcgcctg
gcgcgcgcggcctgcgacaagtactcgaccccggacaagccgcgcttcgtggccggtgcc
ttgggccccacgcccaagaccgcctccatctcgccggacgtcaacgacccggccgcccgc
aacgtcaccttcgatcaactggtcgcagcctacctcgagcagacccgcgccctggtcgaa
ggcggggccgacgtgctgctggtcgagaccatcttcgacacgctcaactgcaaggcggct
ttgttcgccatcgatactttcttcgaagagagcggcaagcgcctgcccatcatgatctcg
ggcaccgtgacggacgcctccggccgcatcctgtcgggccagaccgtgaccgcgttctgg
aactccatccgccatgcgcgcccgctgaccgtgggcctgaactgcgccctcggtgcggcc
ctgatgcgcccctatgcggaagagctgtccaagatcgccgacaccttcgtctgcatctat
cccaacgccggcctgcccaatccgatgagcgacaccggcttcgatgaaacacccgatgtc
acctctgcattgttgaaggaattcgccgagagcggtttcgtcaacgtcgccggtggctgc
tgcggcaccacgccgccgcacatcaaggccattgccgagacggtggccacgatccccccg
cgcaaagtccccgagccgacccacgagatgcgcctgtcgggcctggagcccttcaccatc
aatgacgattcgctgtatgtgaacgtcggcgagcgcaccaacgtcaccggttccaaggcc
ttcgcccgcctgatcctgaacgaacagtacgacgaagccttggccgtggcccgccagcag
gtcgagaacggcgcccagatcatcgacatcaacatggatgaagcgatgctcgattcggtc
gccgccatgacgcgcttcctcaacctgatcgcctccgagcccgacatcgcgcgcgtgccc
atcatgatcgactcttccaaatgggaagtcatcgaagcgggcctgaagtgcgtgcagggc
aagtccatcgtcaactccatctcgatgaaggaaggcgaggagaaattcctgcgcgaagcc
aagctgtgccgccgctatggcgcggccgtcatcgtcatggccttcgacgaagtgggccag
gctgataccttcgcccgcaagatcgagatctgcgaacgcgcctatcgcctgttggtggac
aagctggacttcccgcccgaagacatcatcttcgaccccaacatcttcgcggtcgccacc
ggcatcgaggaacacaacaactacgcggtcgacttcatcgaagccacccgctggatccac
cagaacctgccctacgccaagatcagcggcggtgtttccaacgtctccttcagcttccgc
ggcaatgatccggcgcgtgaagcgatccacaccgttttcctgtatcacgccatcaaggcc
ggcatgaccatgggcatcgtcaatgccggcatgatcggtgtttacgacgacctgccggcc
gagctgcgcgagcgcgtggaagatgtggtcctgaaccgccgcgaagacgccaccgaacgc
atgatcgaatacgccgcgacgctcaaggccggcgacaagaaggaagaagccaccctcgaa
tggcgcaacctgccggtggccaagcgtctctcgcatgcgctggtgcacggcatcacgcaa
tggatcgtggaagacaccgaagaggtgcgccagcagatcgccgccgatggcggccgcccc
atccatgtgatcgaaggtccgctgatggatggcatgaacgtggtcggcgacctgttcggc
cagggcaagatgttcctgccgcaggtggtcaagtctgcgcgcgtgatgaagcaggccgtg
gcgcacctgatccccttcatcgaggaagagaagcgccagctcgaaatcgccaccggtgaa
gtcgccaagcccaagggcaagatcgtcattgccaccgtcaagggcgacgtccacgacatc
ggcaagaacatcgtcaccgtcgtcctccagtgcaacaacttcgaggtcgtcaacatgggc
gtgatggtgccctgcgccgagatcctggccaaggccaaggaagagaaggccgacatcatc
ggtctttccggcctgatcaccccgtcgctggaagagatggcctacgtcgccaaggaaatg
cagcgcgatccgtatttcgccggtctcaagatgccgctgatgatcggtggcgcgaccacc
tcgcgcgcgcatacggccgtcaagatcgcccccaactacgaaggcccggtggtctacgtg
ccggacgcctcgcgtgccgtgtcggtggcgcaatcgctgctggccgacgagcagaagacc
cagtacgtggctgaactgaacgccgactacgaacgcatccgcgaacagcacgccagcaag
aaggccgcacccatgctgtcgctggcggcagcgcgcgccaacaagaccaagctggacttc
gccccggtcaggcccaagttcatcggccgccgcctgttcaagaatgtggacctgggtttg
ctggccaactacatcgactggggtccgttcttccagacctgggatctggccggtccttac
cctgccatcctcaccgatgaagtcgtgggcgaagccgcgaccaaggtcttccaggaagcc
caggcgatgctgaagaagatcatcgacggccgctggctcaccgccaatggcgtcatctcg
ctcttgccggccaacaccgtcaacgacgacgacatcgagatctacaccgacgacagccgt
agccaggttgccttcacttactatggcctgcgccagcagaccgagaagccggtggtcgat
ggcgtggcgcgtcccaaccagtgcctgtctgacttcatcgcgcccaaggactcgggcgtg
caggattacatcggcatgtttgccgtcaccgccggcctcggtatcgagaaatacgaaaag
cgcttcgaggatgcccacgacgattactcctcgatcatgctcaaggccctggctgaccgc
ctggccgaagccttcgccgaatacctgcatgaacgcgtgcgcaaggacctgtggggctac
gcggccgatgagaacctgagcagcaccgatctcatcaaggaaaaatatctcggcatccgt
cccgcacccggctatccggcctgcccggagcacaccgtgaaggctgacgctttccgcgtc
atgcagtgcgatgaaatcggcatgcagctcaccgagtcttacgccatgttccccggtgcc
tcggtatcgggcttctacttcgcacatccgcagtcgaagtacttcgtggtcggcaagatc
ggcgaagaccaggtggccgatatggcagagcgccgtcatgtgcccagggaagaggtggaa
cgctggctggcgccgaatctgtaa
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