Herbaspirillum sp. DW155: HBDW_47480
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Entry
HBDW_47480 CDS
T10195
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hew Herbaspirillum sp. DW155
Pathway
hew01501
beta-Lactam resistance
hew01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBDW_47480
01503 Cationic antimicrobial peptide (CAMP) resistance
HBDW_47480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hew03036
]
HBDW_47480
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_47480
01504 Antimicrobial resistance genes [BR:
hew01504
]
HBDW_47480
Chromosome and associated proteins [BR:
hew03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HBDW_47480
Transporters [BR:
hew02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HBDW_47480
Antimicrobial resistance genes [BR:
hew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HBDW_47480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF1344
Motif
Other DBs
NCBI-ProteinID:
BEV17960
LinkDB
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Position
complement(5254876..5256168)
Genome browser
AA seq
430 aa
AA seq
DB search
MFHTASTARHAGRRSSTAARLALSLMLVAVLGACSRSGDQPKPAAQSEVGYVVLKTQRQS
LTTELPGRTTAYLAADIRPQVGGIIQKRLFKEGSLVKAGQPLYQIDPASYQAAYDSAKAS
LLKAQATLASSRLKADRYAELNKIDAVARQDNDDAQSTLRQNQADVEVQKAAVQTAAINL
QYTRILSPISGRIEKSSVTPGALVTASQTTALTTVQQIDPIYVDVTQSTVDLLRLRRELA
SGQISKSGANAAQVKILLEDGSTYDHPGKLEFTGLSVDTGTGMITLRAVVPNPDGVLLPG
AYVRAVLEEGVDEHALLVPQKAISRDQTGAATALVVGSDGKVQQRVVTVARAVGNNWWIS
KGLQEGDKLIVDGLQKVRAGDTPRAIDITDSLQKDLAREAAAAAADPSLGGDAGRAAGAG
TAAASGARSK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttccatactgcaagcactgcgcgccacgccgggcgccgttcctccaccgcagcgcgc
ctggcgctgtccctgatgctggttgccgtcctgggcgcctgctccagatcgggcgaccag
cccaaaccggcggcccagtccgaagtcggctacgtggtcctcaagacgcagcgccagtcg
ctcaccaccgagctgcccggccgtaccacggcctacctggcggccgacatccgtccccag
gtgggcggcatcatccagaagcgcctgttcaaggaaggcagcctggtcaaggccggccag
ccgctgtaccagatcgacccggccagctatcaggcggcctatgacagcgccaaggcttcg
ctcctgaaggcgcaggccacgctggcttcctccaggctgaaggccgaccgttatgccgag
ctgaacaagatcgatgccgtcgccaggcaggacaacgatgacgcccaaagcaccctgcgc
cagaaccaggccgatgtggaagtgcagaaggccgccgtgcagaccgccgccatcaacctg
caatacaccaggatcctttcgccgatctcgggccgcatcgaaaaatccagcgtcacgccc
ggcgcgctggtgacggccagccagaccacggcactgaccacggtacaacagatcgatccg
atttacgtcgacgtcacccagtccaccgtggacctgctgcgcctgcgccgcgaactggcc
agcggccagatcagcaagagcggcgccaacgcggcccaggtcaagatcctgctggaagac
ggctccacctatgatcatcccggcaagctggaattcaccggtctgtcggtcgataccggc
accggcatgatcacgctgcgcgcggtcgtgcccaatccggatggcgtgttgctgccgggc
gcctacgtgcgtgcggtgctggaggagggggtggatgaacacgccctgctggtaccgcag
aaggccatcagccgcgaccagaccggtgctgccaccgccctggtggtgggcagtgacggc
aaggtgcagcagcgcgtggtgaccgtggcgcgtgcggtgggtaacaactggtggatcagc
aagggcttgcaggaaggtgacaagctcatcgtcgacggattgcagaaggtgcgcgccggc
gataccccgcgtgccatcgacatcaccgacagcctgcagaaggatctggcgcgcgaagcc
gcagcggccgccgctgatccgtcgctgggcggggatgccggccgggctgccggcgcagga
acggcggctgcttccggcgcccggtcgaagtaa
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