Herbaspirillum frisingense: G5S34_01530
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Entry
G5S34_01530 CDS
T06761
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00300
Lysine biosynthesis
hfr00550
Peptidoglycan biosynthesis
hfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5S34_01530
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G5S34_01530
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hfr01011
]
G5S34_01530
Enzymes [BR:
hfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
G5S34_01530
Peptidoglycan biosynthesis and degradation proteins [BR:
hfr01011
]
Precursor biosynthesis
Amino acid ligase
G5S34_01530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QNB05587
LinkDB
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Position
334612..336138
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AA seq
508 aa
AA seq
DB search
MSKRVLSLQDILAWLRQAAPSAQLTSDSRRVAPGDVFFAYVGDADGRSYIADAVERGAAA
VVYEAEGYTWPQEIDEPHLAVPDLKAQAGEIAAAWYGQPDQGMLTVAVTGTNGKTSCAWW
LGSALSRMPGISNAGVIGTLGVGSFIGGKQQGFDVTGYTTPDAVLLQRSLSRLAQGRVTA
LAIEASSIGLAQGRMNGMHVDVALFTNFTRDHLDFHGDMQTYEDAKRKLFQWPGLKHAVL
NLDDPMGLRLLPLLAGRQVPVIGYALAEEADAQADGIPTLRASQLRSSHAGTVFHVDSPF
GSGQVKTQLVGRFNVSNVLGIMGVLLTQGLAWDAVVAAAAALTPAPGRMQQFGGPDVPLI
VIDYAHTPDALDKTLSALRQVATQRGGQLWCVFGCGGDRDPGKRPQMGQIAEQADHVVLT
SDNPRSEDPQAIIEQIRAGMSRVEPVLLADRAGAILWAIRHATKADVVLLAGKGHEAYQE
IAGKKLPFLDADHVALALAARSTMMGGA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgcgttctgagcctgcaagacatactcgcctggctgcgccaggcggcgccg
tctgcgcaactgacgtccgattcgcgccgcgtggcgccgggcgacgtcttcttcgcctac
gtgggcgatgccgatggacgctcctatatcgccgatgccgtcgagcgcggtgcggctgcg
gtcgtctatgaagccgagggctacacctggccacaagagatcgacgaaccgcacctggcc
gtgcccgacctcaaggcgcaggccggcgagattgccgccgcctggtatgggcagcccgac
cagggcatgctgaccgtggccgtcaccggtaccaatggcaagacctcctgcgcctggtgg
ctggggagcgccctgtcgcgcatgccgggcatcagcaatgccggcgtgatcggcacgctg
ggcgtgggcagtttcatcggcggcaagcagcagggtttcgacgtgaccggctataccacc
ccggacgcggtgctgctgcagcgcagcctgtcccggctggcccagggacgcgtcacggcg
ctggccatcgaggcttcctcgatcgggctggcacaagggcgcatgaacggcatgcatgtg
gatgtcgccctgttcaccaatttcacgcgtgaccacctggatttccacggtgacatgcag
acctacgaagacgccaagcgcaagctgttccagtggcccggtctgaagcacgccgtgctc
aatctggacgatcccatgggcctgcgcctgctgcccttgttggcggggcgccaggtgccg
gtgatcggctacgcgctggccgaagaggctgacgcccaggcggacggcatccccacgctg
cgcgccagccagttgcgcagcagccatgccggtaccgtgttccatgtcgattcgcccttc
ggcagcggccaggtcaagacccagctggtgggccgcttcaatgtcagcaatgtgctgggc
atcatgggcgtgctgctgacgcaaggactggcctgggacgccgtcgtggcggccgctgcc
gccctgacgcccgcgcccggccgcatgcaacagttcggcgggccggacgtgccactgatc
gtgatcgattacgcgcatacccccgatgcgctggacaagaccctgtccgcgctgcgccag
gtcgcgacccagcgcggcggccagctgtggtgcgtgttcggctgcgggggcgaccgcgat
ccgggcaagcgcccgcagatgggccagatcgccgagcaggccgaccatgtggtactgacc
agcgacaatccgcgcagcgaagacccgcaagccatcatcgaacagatccgtgccggcatg
agccgcgtggaaccggtgctgctggccgaccgcgccggcgccatcctgtgggccatccgc
cacgccaccaaggcggatgtggtgctgctggccggcaagggccatgaggcctaccaggaa
atcgccggcaagaagttgcccttcctcgacgccgaccatgtcgccctggcgctggctgcg
cgctccaccatgatggggggcgcatga
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