Herbaspirillum frisingense: G5S34_24180
Help
Entry
G5S34_24180 CDS
T06761
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr01501
beta-Lactam resistance
hfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G5S34_24180
01503 Cationic antimicrobial peptide (CAMP) resistance
G5S34_24180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hfr03036
]
G5S34_24180
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_24180
01504 Antimicrobial resistance genes [BR:
hfr01504
]
G5S34_24180
Chromosome and associated proteins [BR:
hfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
G5S34_24180
Transporters [BR:
hfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
G5S34_24180
Antimicrobial resistance genes [BR:
hfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G5S34_24180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CSD2
BMFP
Motif
Other DBs
NCBI-ProteinID:
QNB09557
LinkDB
All DBs
Position
complement(5324807..5326021)
Genome browser
AA seq
404 aa
AA seq
DB search
MSHDRHSELGIHPLSEGEPQQRQQMMKRARLVLVVVLILLAAGAARTIISRTANAHALEA
GTAERAKVFVRVTEARSSADGQTLALPGTLQGFVQSPISARSGGYLKRWYKDIGAEVKKG
DLLAELDTPEIDQQLSQALAARQQAASSMELAKSSMARWEALRKKDAVSQQELDERRSAF
AQASSNLAAADANVERLRQVEGFKRIVAPFSGIITRRNVDVGDLIDPGAGRSLFVLSQTD
PLRVYVNVPQSYANLVKPGQQVTVTQSELRGRKFEGKVARTAGSIDPATRSMQIEVTLAN
ADNALLPGAFVQVALPLKPSGTLLVAADTLMFRRDGSLVAAVDEQNKVQLKKVRLGRNFG
LTVEVLEGLSGKEKLILNPSDSLSEGDQVEPTLEQPAPAKKAAS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgaccgtcattccgaactcggcatccaccccctttccgagggcgagccgcaa
cagcgccagcagatgatgaagcgcgcccggctggtgctggtggtggtgctgatcctgctg
gccgcaggcgcggcgcgtaccatcatcagccgcacggccaacgcacacgccctggaagcc
ggcaccgccgagcgcgccaaggtgttcgtgcgcgtgaccgaagcgcgcagcagcgccgat
ggccagaccctggccctgccggggaccttgcagggcttcgtgcagtcgcccatctcggcg
cgttccggcggctacctcaagcgctggtacaaggacatcggcgccgaggtcaagaagggc
gacctgctggccgaactggataccccggaaatcgaccagcaactctcgcaggccctggcc
gcccgccagcaggccgcctccagcatggaactggcgaagagttcgatggcccgctgggaa
gccctgcgcaagaaggatgcggtttcgcagcaggaactggatgaacgtcgcagcgccttc
gcccaggccagctccaacctggcggcagccgacgccaacgtcgaacggttgcgccaggtg
gagggcttcaagcgcatcgtggcaccgttctcgggcatcatcacgcgccgcaacgtggac
gtgggcgacctgatcgatccgggcgcggggcgctcgctgttcgtgctctcgcagaccgat
ccgctgcgggtctatgtcaacgtgccgcagtcctacgccaacctggtcaagccgggccag
caggtcacggtcacccagtccgaactgcgcggccgcaagttcgaaggcaaggtggcgcgt
actgcggggtccatcgatccggccacccgctccatgcagatcgaggtgaccctggccaat
gccgataacgccctgctgcccggtgccttcgtgcaggtggcgctgcccctgaaacccagc
ggcaccttgctggtagcggccgatacgttgatgttccggcgcgacggttcgctggtggcg
gccgtcgatgagcagaacaaggtgcagctcaagaaggtccggctggggcgcaacttcggg
ctcaccgtggaagtgctggagggcttgagcggcaaggaaaaactgatcctcaatccctcc
gattcgctgtccgaaggtgaccaggtcgaacccaccctggagcagcccgctccagcgaag
aaggccgcatcatga
DBGET
integrated database retrieval system
