Candidatus Hydrogenisulfobacillus filiaventi: R50_1364
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Entry
R50_1364 CDS
T08923
Symbol
pdeB
Name
(GenBank) 2'3' and 3'5' cyclic nucleotide monophosphates phosphodiesterase involved in biofilm formation
KO
K09769
2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:
3.1.4.16
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv00230
Purine metabolism
hfv00240
Pyrimidine metabolism
hfv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
R50_1364 (pdeB)
00240 Pyrimidine metabolism
R50_1364 (pdeB)
Enzymes [BR:
hfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
R50_1364 (pdeB)
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GFIT
Motif
Pfam:
YmdB
Metallophos
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
CAB1128870
UniProt:
A0A6F8ZGG4
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All DBs
Position
1:complement(1273424..1274248)
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AA seq
274 aa
AA seq
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MRLLMVGDVVGRVGRRMLAAELTRLRASAAPDLVVVNGENAAGGNGITHEILDEILAQGV
QVVTSGNHIFDKREVLTFLDEVPQLLRPLNLPPGTPGHGYVVTAAGGVPAAVINLAGRAF
MPVQYDDPFRAVDAVLASLPEEVRVVVVDFHAETTSEKVAMGWYLDGRVSVVAGTHTHVQ
TADARILPGGTAYLTDLGMTGPAFSVIGVRTELVLQKLTTQLPVRFETAGGPGVFSGLLV
DINPADGRAYHIERLLRWEEAAGGDQEGHGWEHA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcttgatggtgggggacgtggtcgggcgggtcggccggcgcatgctggccgct
gaactgacccgcctgcgcgccagcgcggcccccgacttggtggtggtcaacggggagaac
gccgccgggggtaatggcatcacccatgagatcctggatgagatcctggcccagggggtc
caggtggtcacctcggggaaccacatctttgacaagcgggaggtcctcaccttcctggat
gaggtccctcagctgctgcgccccctcaacctgccgccggggacgcccggccacggttat
gtggtgacggccgccgggggagtgccggccgcggtgatcaacctggccggcagggccttc
atgcctgtgcagtacgacgaccccttccgggcggtggacgcggtcctggcctccctgccg
gaggaggtgcgggtggtggtggtggactttcatgccgagaccacctccgagaaggtggcc
atgggctggtacctggatggtcgggtgtcggtggtggcgggcacccatacccatgtgcag
acggccgacgcccgtatcctgcccggcggcaccgcctacttgaccgacctcggcatgacg
gggccggccttttccgtgatcggggtgcgcaccgagctggtgctgcagaagctgaccacc
cagctgccggtccggttcgaaaccgctgggggcccgggggtcttctccgggctgctggtg
gatatcaacccggccgacgggcgggcgtatcatatcgagcgcctgttgcggtgggaggag
gcggcgggaggggatcaggaggggcacggatgggagcacgcatga
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