Heterocephalus glaber (naked mole-rat): 101696346
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Entry
101696346 CDS
T02812
Symbol
Kdm2b
Name
(RefSeq) lysine demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101696346 (Kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgl03000
]
101696346 (Kdm2b)
04121 Ubiquitin system [BR:
hgl04121
]
101696346 (Kdm2b)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101696346 (Kdm2b)
Enzymes [BR:
hgl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
101696346 (Kdm2b)
Transcription factors [BR:
hgl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
101696346 (Kdm2b)
Ubiquitin system [BR:
hgl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101696346 (Kdm2b)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101696346 (Kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
101696346 (Kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
101696346
NCBI-ProteinID:
XP_004843904
UniProt:
A0AAX6P597
LinkDB
All DBs
Position
Un
AA seq
1333 aa
AA seq
DB search
MAGSQTGIWTGSPLPPKAMEWKRKKRLYTKCFVFGSPAQRPIDRQRYDENEDLSDVEEIV
SVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDF
TVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKL
EHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHI
DFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQG
YTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLQIYEIEDRTRVQPKFRYPFYYEMC
WYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKASVDGFSSDSWLEMEEESCEQQPQEEE
GEKEEEGDGLEKAPKPCPDGPASPGGTPSEEQETPGKKPKAPATHFFKRTLSNESEDSVK
SATVPGDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQ
ALLEGVKNVLKEHAEDDPSLAVTGVPVVSWPKKTPKNRAVGRPKGKLGPSSTVKLAANRT
TAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVC
LVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKC
NHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHP
KKVPVDSILRRKSDDVHLRRKRKYEKPQELSARKRASTLQTSPGSSHLSPRPPLGSSLSP
WWRSSLTYFQQQLKPGKEDKLFRKKRRSWKNAEDRMPLATKPLRRFKQEPEDDLPEAPPK
SRDSDHSRSSSPTAGPSTEGAEGSEEKKKVKMRRKRRLPNKELSKELSKELNHEIQKTES
SLAHENHQPIKSEPESENEEPKRPLGHCERPHRFSKGLNGTPRELRHPLGHGLRSPPRVI
SRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLC
VCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPASLDLSWTNISKKQLSW
LINRLPGLRDLVLAGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRP
GQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVG
TTTRDSLTEIILSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQ
FGQVEEKLLQKLS
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttcgcaaacggggatctggacaggatcgcccctccccccaaaagccatggag
tggaaaagaaaaaaaagattatatacaaaatgctttgtatttgggtcgccagcgcagcgt
ccgattgaccgccagagatacgacgagaacgaggacttgtcggacgtggaagagatcgtc
agcgtccgcggcttcagcctggaggagaagctgcgcagccagctgtaccagggggacttc
gtgcacgccatggagggcaaagatttcaactatgagtacgtacagagagaagctctcagg
gtacccctgatatttcgagaaaaggacggactaggaattaagatgcctgaccctgatttc
acagttcgggacgtcaagctcctcgtggggagccggcgactggtggacgtgatggacgtg
aacacccagaagggcacggagatgagcatgtcccagttcgtgcgctattacgagacgccc
gaggcccagcgggacaagctgtacaacgtcatcagcctggagtttagccacaccaagctg
gagcacctggtcaagcgtcccaccgtggtggatctggtggactgggtcgacaacatgtgg
ccccaacacctgaaggagaagcagactgaggccaccaatgccattgcagagatgaagtac
cccaaagtgaagaagtactgtctgatgagtgtgaagggctgtttcactgacttccacatc
gacttcggaggcacttctgtgtggtaccatgtgttccggggagggaagatcttttggctg
atcccaccgaccctgcacaatttggctctgtatgaggagtgggtgctgtcaggcaagcag
agtgacatctttctgggagaccgtgtggagcgatgccaaagaattgaactgaaacagggc
tacacatttttcatcccttctggttggatccatgcagtctacacccctgtagactccctg
gtgttcggtggaaacatcctgcacagctttaacgtgcccatgcagctgcagatctacgag
atcgaggacagaacccgggtgcagcccaagttccggtaccccttctactatgagatgtgc
tggtatgtcctggagagatacgtgtactgcgtgacccagcgctcctacctcactcaggag
taccagagagagtccatgctcattgatgccccacggaaggccagtgtagacggcttctcg
tccgattcctggctggagatggaggaggagtcctgtgagcagcagccccaggaggaggag
ggggagaaggaggaggagggggatggcttggagaaggcgcccaagccttgccctgatggc
cctgcctcgcccggcggcaccccgtccgaggagcaggagaccccagggaagaagcccaag
gcacccgccacgcacttcttcaaaaggactttgtcgaacgagtcggaggacagcgtcaag
tcggccaccgtgcccggcgactacccgaagacgcccactggctcgcccgccactgaggtg
tctgccaagtggacccacctcaccgagtttgagctgaaggggctgaaggccctggtggag
aagctcgagtccctccctgagaacaagaagtgtgtccctgagggcatcgaggacccccag
gcactcctggagggcgtgaagaatgtcctgaaggaacatgcagaggatgaccccagcctg
gccgttactggagtccctgtggtcagttggccaaagaagactccaaagaaccgggcagtg
ggtcggcccaaggggaagctgggcccatcctccacagtgaaattggctgccaaccgaacg
acagcaggagctcgcaggcgccggacgagatgccgcaagtgcgaggcgtgcctgaggaca
gagtgtggagagtgccacttctgcaaggacatgaagaagttcgggggccccgggcggatg
aagcagagctgcatcatgcggcagtgcattgcgccagtgctgccccataccgctgtgtgc
cttgtgtgtggcgaggcagggaaggaggacacagtggaagaggaggaaggcaagttcaac
ctcatgctcatggagtgctccatctgcaatgagatcatccaccctggctgccttaagatt
aaggagtcagagggtgtggtcaacgacgagcttccaaactgctgggagtgtccgaagtgc
aaccacgctggcaagaccgggaaacaaaagcgtggccctggctttaagtatgcctccaac
ctgcccggctccctgctcaaggagcagaagatgaaccgggacaacaaggaagggcaggag
cctgccaagcggaggagtgagtgtgaggaggcgcccaggcgcaggtcggacgagcacccc
aagaaggtgccggtggacagcatcctgcgccgaaagtcggatgatgtgcacctgaggagg
aagcggaaatatgagaagccccaggagctgagtgcacgcaagcgagcctcgacgcttcaa
acgtcccccggttcctctcacctctcgccgaggccccctctaggcagcagcctcagcccc
tggtggagatccagtctcacttacttccagcagcagctaaagcctggcaaagaagataag
cttttcaggaagaagcggaggtcctggaagaacgctgaggaccggatgccactggctacg
aagcccctgcggcgcttcaagcaggagccagaggatgatttgcctgaggcgccccccaaa
agcagggacagtgaccactcacgctctagctcgcccaccgcagggcccagcacggagggg
gccgagggctcggaggaaaagaagaaagtgaagatgcgccggaaacggcggcttcccaat
aaggagctgagcaaggagctgagcaaggagctcaaccatgagatccagaaaacagagagc
agcctggcccatgagaaccaccagcccatcaagtcagagcccgagagcgagaatgaggag
cccaagcggccgctgggccactgtgagcggccccaccgcttcagcaaggggctcaacggc
accccccgggagttgcggcacccgctgggccacggcctgcgcagcccgccccgggtcatc
tcccggcccccaccctctgtgtccccgcccaagtgcatccagatggagcgccacgtgatc
cgcccgccccccatcagccccccacctgactcgctgcccctggacgatggggcggcccac
gtcatgcacagggaggtgtggatggccgtcttcagctacctcagccaccaagacctgtgt
gtctgcatgcgggtctgcaggacctggaaccgctggtgctgtgataagcggttgtggacc
cgcatcgacctgaaccactgcaagtccatcacgcccttgatgctcagtggcatcattcgg
cgccagcccgcctcccttgacctcagctggaccaacatttctaagaagcagctgagctgg
ctcatcaaccgcctgcctgggctccgagacttggtgctggcaggctgctcctggatcgca
gtctctgcgctctgtagctccagttgtccgctgctccggaccctggatgtccagtgggta
gaagggctcaaggacgcccagatgcgggatctcctgtccccgcccacagataacaggcca
ggtcagatggacaatcggagtaagctccggaacatcgtggagctgcgcctggcaggtctg
gacatcacagatgcctccctgcggctcatcatccgccacatgcccctgctctccaagctg
cacctcagttattgtaaccacgtcacagaccagtccatcaacctgctcactgcggttggc
accaccacccgggactctctgaccgagatcatcctgtcagactgcaataaggtcactgat
cagtgcctgtccttcttcaaacgctgtgggaacatctgccatattgacctgaggtactgc
aagcaagtcaccaaggaaggctgtgagcagttcattgctgagatgtccgtgagtgtccag
ttcgggcaagtcgaagaaaaactcctgcagaaactgagttag
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integrated database retrieval system
