Heterocephalus glaber (naked mole-rat): 101701581 Help Entry 101701581         CDS       T02812                                  Symbol Thbs1 Name (RefSeq) thrombospondin 1   KO K16857   thrombospondin 1 Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl04015   Rap1 signaling pathway hgl04115   p53 signaling pathway hgl04145   Phagosome hgl04148   Efferocytosis hgl04151   PI3K-Akt signaling pathway hgl04350   TGF-beta signaling pathway hgl04510   Focal adhesion hgl04512   ECM-receptor interaction hgl04820   Cytoskeleton in muscle cells hgl05144   Malaria hgl05165   Human papillomavirus infection hgl05205   Proteoglycans in cancer hgl05206   MicroRNAs in cancer hgl05219   Bladder cancer Brite KEGG Orthology (KO) [BR:hgl00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     101701581 (Thbs1)    04350 TGF-beta signaling pathway     101701581 (Thbs1)    04151 PI3K-Akt signaling pathway     101701581 (Thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101701581 (Thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     101701581 (Thbs1)    04148 Efferocytosis     101701581 (Thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     101701581 (Thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     101701581 (Thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101701581 (Thbs1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     101701581 (Thbs1)    05205 Proteoglycans in cancer     101701581 (Thbs1)   09162 Cancer: specific types    05219 Bladder cancer     101701581 (Thbs1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101701581 (Thbs1)   09174 Infectious disease: parasitic    05144 Malaria     101701581 (Thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:hgl04131]     101701581 (Thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hgl00536]     101701581 (Thbs1) Membrane trafficking [BR:hgl04131]  Endocytosis   Phagocytosis    Opsonins     101701581 (Thbs1) Glycosaminoglycan binding proteins [BR:hgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101701581 (Thbs1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 EGF_CA Laminin_G_2 TSP1_CCN EGF Laminin_G_1 CEP63 Motif Other DBs NCBI-GeneID:  101701581 NCBI-ProteinID:  XP_004861585 UniProt:  A0A0P6JVU0 LinkDB All DBs Position Un AA seq 1171 aa AA seqDB search MRLAWGLSVLFLVHVCGSNRIPESGGDSSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IENANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQLKKTRGTLLAVERKDHSGQIFSVV SNGKAGTLDLSLSVQGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFSRDLASIARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSATNVL LTLDNTVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRRLHTVVTTLQDSIR KVMEENRQLVEEVRRPPLCYHNGVQHGNNERWTVDSCTQCHCQNSVTICKKVSCPIMPCS NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGSGIQQRGRSCDSLNNRCEGSSVQ TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMDGKPCEGEAR ETKACRRDPCPISGGWGPWSLWDICSVTCGGGLQTRSRLCNNPAPQFGGKDCIGDVTESQ VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPAGYSGNGIQCKDVDECREVPDAC FNHNGEHRCKNTDPGYNCLPCPPRFTGTQPYGQGVQHATANKQVCKPRNPCTDGTHNCNK NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCP NLPNSGQEDYDKDGIGDACDEDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY NHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRR FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaggctggcctggggactcagtgtcctgttcctagtgcacgtgtgtggcagcaaccgg attccagagtctgggggagacagcagcgtgtttgacatctttgaactcacgggggctgcc cgaaaaggttctgggcgccggctagtgaagggtcctgacccgtccagcccagctttccgc attgagaatgccaacctgatcccacctgtgcctgacgacaagttccaagacctagtcgac gctgtgcgggcagagaaaggcttcctcctcctggcctccctgaggcagctgaagaagacc cgaggcacattgctggcggtggagcggaaagaccactctggccagatcttcagcgtggtc tccaacggcaaggctggaaccctggacctgagcctgagcgtgcagggcaagcagcaggtg gtgtcagtggaggaagctctcctggccactggccagtggaagagcatcaccctgtttgtg caggaagacagggcccagctgtacatcgactgtgaaaagatggagaacgctgagctggat gtccccatccagagcatcttctccagggacctggccagtattgccaggctgcgtgtcgca aagggagatgtcaatgacaatttccagggggtgctgcagaatgtgcggtttgtctttgga accacacctgaagacatcctcaggaacaaaggctgctccagctctgctaccaatgtcctt ctcaccctggacaacaccgtggtgaatggttccagccctgccatccgcactaactacatt ggccacaagacaaaggacctgcaggccatctgtggcatctcctgtgatgagctgtccagc atggtcctggagctccggcgcctgcacactgtcgtgaccacgctgcaggacagcatccga aaagtgatggaagagaacagacaattggtcgaggaggtgaggagacctcccctctgctat cacaatggagttcagcacggaaataatgagaggtggactgtggatagctgcacccagtgt cactgtcagaactcagttaccatctgcaagaaggtgtcctgccccatcatgccctgctcc aacgccacagttcctgacggagagtgctgcccacggtgctggcccagtgactctgcagat gatggctggtcaccctggtctgagtggacttcctgctctgcaacgtgtggcagtgggatt cagcagcgtgggcggtcttgtgacagcctcaacaaccgatgtgaaggctcctctgtgcag acgaggacctgccacattcaggagtgcgacaagagatttaaacaggatggtggctggagc cactggtccccatggtcatcttgctctgtgacatgtggagatggtgtgatcaccaggatc cggctctgcaactcccccagcccccagatggatgggaaaccgtgtgaaggcgaagcccga gagaccaaggcctgcaggagagacccctgccccatcagtggaggctgggggccctggtca ctgtgggacatctgctccgtcacttgtggaggaggactgcagacacgtagccggctctgc aacaaccctgcaccgcagtttggaggcaaagactgcattggtgatgtgacagaaagccaa gtctgcaacaagcaggactgtccaattgatggatgcctgtccaacccttgctttgccggg gccaagtgtaccagctatcccgatggcagctggaaatgtggtgcttgtcctgctggttac agtggaaatggcatccagtgcaaagatgttgatgagtgcagagaagtgcccgatgcctgc tttaaccacaacggagaacacaggtgcaaaaacacagaccctgggtacaactgcctgccc tgcccaccgcgtttcacaggcacacagccctatggccagggtgtccaacatgccacagcc aacaaacaggtgtgcaagccccgcaacccctgcactgatgggacacacaactgcaacaag aatgccaagtgcaactacctgggccactacagcgaccccatgtaccgctgcgagtgtaag cctggctatgctggcaatggcattatctgcggggaggacacagacttggatggctggccc aacgaggacctggtgtgtgtggccaatgcaacctaccactgcaaaaaggacaattgtccc aacctccccaattcagggcaggaagactatgacaaggatggaatcggtgatgcctgtgat gaggatgacgacaacgataaaattccagacgatagggacaattgtccgttccattacaac ccagctcagtacgactacgacagagatgatgtgggagaccgttgtgacaactgcccctac aaccacaacccagatcaggcggacacagacaacaatggggaaggagatgcctgtgccgca gacatcgacggagacggcatcctcaatgaacgggacaactgtcagtatgtctacaatgtg gaccagagggacacagatatggatggggttggggatcagtgtgacaactgccccctggag cacaacccagatcagctggactctgactcagaccgcattggggacacttgtgacaacaat caggacattgatgaagatggccaccagaacaatctggacaattgtccctatgtccccaat gccaaccaggctgaccacgataaagatggcaagggagatgcctgtgaccatgatgatgac aacgatggcattcccgatgacagggacaactgcaggctggtgcccaatcccgaccagaag gactccgatggtgatggtcgaggtgatgcctgcaaagatgactttgatcatgacagtgtg ccagacattgatgacatctgtcctgagaatgttgacatcagtgagactgatttccgccgt ttccagatgattcctctagatcccaaaggaacatcacaaaatgaccctaactgggttgta cgccatcagggcaaagaacttgtccagactgtcaactgtgatcctggacttgctataggt tttgatgagtttaatgctgtggacttcagtggcaccttcttcatcaacactgaaagggat gatgactacgccggttttgtgttcggataccagtccagcagccgcttctacgtcgtcatg tggaagcaagtcactcagtcctactgggacaccaaccccaccagagcccagggttactct ggcctttctgtgaaagtcgtgaactccaccacgggacccggcgagcacctgcgtaatgcc ctgtggcacacaggcaacacccccggccaggtgcgcaccctgtggcatgaccctcgtcac ataggctggaaagatttcaccgcctacagatggcgtctcagccacaggccgaagacaggt ttcatcagagtggtgatgtatgaagggaagaaaatcatggcggactcaggacccatctat gataaaacctatgctggtgggagactaggattatttgtcttctctcaagaaatggtgttc ttctctgacctgaaatatgaatgcagagattcctaa

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