Heterocephalus glaber (naked mole-rat): 101709324
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Entry
101709324 CDS
T02812
Symbol
Eftud2
Name
(RefSeq) elongation factor Tu GTP binding domain containing 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101709324 (Eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101709324 (Eftud2)
Spliceosome [BR:
hgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101709324 (Eftud2)
Complex C
U5 SnRNP specific factors
101709324 (Eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101709324
NCBI-ProteinID:
XP_004859249
UniProt:
G5BJ06
LinkDB
All DBs
Position
Un
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRETKDLDEVDEDEDEDDVGEHDEEHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPLTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPGTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgaattcgggaattatattggaccagagcttgattctgat
gatgatgatgatgaattgggccgagagaccaaagatcttgatgaggtggacgaggacgag
gacgaggacgacgtgggtgagcacgacgaggagcaccccgggatggaggtggtgctgcac
gaggacaagaagtactacccgacggctgaggaggtgtacggccccgaggtggagaccatc
gtgcaggaggaggatacccagcccctcacggagcccattattaagcctgtgaagaccaag
aagttcacgctgatggagcagactctgcctctgacggtgtatgagatggatttcttggct
gacctgatggacaactcggagctcatccgaaacgtgaccctctgcggccatctccaccac
ggcaagacctgttttgtggattgcttgatagagcagacgcacccagaaatccgaaagcgc
tatgaccaggatctgtgctacactgacatcctcttcaccgagcaggagcgaggtgtgggc
atcaagagcacccccgtgacagtggtcctgccgggcaccaaggggaagtcgtacctcttc
aacatcatggacaccccaggacacgtgaacttctccgacgaggtcacagccggcctgcgc
atctccgacggcgtagtcctattcatcgacgctgcggagggggtgatgctgaacaccgag
cggctgatcaagcacgcggtgcaggagaggctggcagtcaccgtgtgcatcaacaagatc
gaccggctcatcctggagctgaagctgccacccaccgatgcctactacaagctgcgccac
atagtggatgaggtcaacgggctgatcagcatgtactccactgatgagaacctcatcctc
tccccgctgctgggcaacgtctgcttctccagctcacagtacagcatctgcttcacgctg
ggctccttcgccaagatctacgccgacaccttcggtgacatcaattatcaggagtttgct
aaaagactctggggtgacatctacttcaaccctaagacgcggaagttcacgaagaaggcc
ccgaccagcagctcccagcggagcttcgtggagttcgtcctggagcccctctacaagatc
ctggcgcaggtggtgggtgacgtggacaccagtctcccgaggaccctggatgagcttggt
atccacctgaccaaggaggagctgaagctgaacatccggcccctgctgcgcctggtctgc
aagaagttctttggggagtttacaggctttgtggacatgtgtgtgcagcacatcccgtcc
cccaaggtgggcgccaagcccaagatcgagcacacctacaccgggggcgtggactccgac
ctcggcgaggccatgagcgactgcgaccctgacggcccgctgatgtgccacaccaccaag
atgtacagcacggacgatggagtccagttccacgccttcggccgggtgctgagcggcacc
atccacgctggacagcccgtaaaggtgctgggagagaactataccctggaggacgaggag
gactcgcagatctgcactgtgggccgcctctggatctcggtggccaggtaccacatcgag
gtgaaccgcgttcccgctggcaactgggtcctgatcgaaggggttgaccagcccattgtg
aagacagcaaccatcaccgagccccgaggcaatgaggaggctcagatcttccggcccctg
aagttcaacaccacgtctgtgatcaagattgccgtggagcccgtcaacccctcagagctg
cccaagatgctggacggccttcgcaaggtgaacaagagctacccgtccctcaccaccaag
gtggaggagtcgggagagcacgtgatcctgggcaccggtgagctctacctggactgcgtg
atgcacgacctgcggaagatgtactcagagatcgacatcaaggtggctgacccagtggtc
acattctgtgagacagtggtggaaacgtcttccctcaagtgctttgcggaaacacccaat
aagaagaacaagatcaccatgatcgccgagccgctggagaaaggcctggccgaggacatc
gagaacgaggtggtgcagatcacctggaacaggaagaagctgggcgagttcttccagacc
aagtatgactgggatctgctggccgcccgctccatctgggcctttggtcctgatgccacc
ggccccaacatcctggtggacgacaccctgccctcggaggtggacaaggccctcctaggc
tccgtgaaagacagcatcgtgcagggcttccagtgggggaccagggaggggcccctctgt
gatgagctgattcgcaacgtcaagtttaagatcctggacgcggtggtggcccaggagcca
ctgcaccgaggcgggggccagatcatccccacagcccggagggtggtctactctgccttc
ctcatggccacgcctcggctgatggagccgtactacttcgtggaggtccaggcacctgcg
gactgcgtgtccgcagtgtacaccgtcctggcccggcgcagggggcacgtgactcaggat
gcgcccattccgggctcacctctctacacaatcaaagctttcatccctgccatcgactcc
ttcggctttgagactgacctccgcactcacacgcagggccaggccttctccctgtctgtc
ttccaccactggcagatcgtacctggtgaccctctggacaagagcatcgtcatcaggccc
ttggagccgcagccggccccacacctggcccgggagttcatgatcaaaacccggcgcagg
aagggcctgagcgaggacgtgagcatcagcaagttcttcgatgaccccatgctgctggag
ctggccaagcaggacgtggtgctcaactacccgatgtga
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