Harpia harpyja (harpy eagle): 128140753
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Entry
128140753 CDS
T10541
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128140753 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhar03041
]
128140753 (EFTUD2)
Spliceosome [BR:
hhar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
128140753 (EFTUD2)
Complex C
U5 SnRNP specific factors
128140753 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
128140753
NCBI-ProteinID:
XP_052640943
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All DBs
Position
4:complement(80749923..80812746)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgatgagtttgggaactacatcgggccggagctggactcggac
gatgacgatgacgagttgggcagagagtctaaagatctggacgagcttgaggatgatgac
gatgatgatgatatgggggaccacgacgaggaccaccctggcatggaggtggtgctgcat
gaggataagaaatactatcccactgctgaggaggtttatgggcctgaagtagagacgata
gtacaagaggaagacacacagcctctcactgagcctattattaaacctgtgaaaaccaaa
aaattctctctgatggaacagacattaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcatcac
ggcaagacttgttttgttgactgcctgatagaacagacacacccagaaatccggaagcgc
tatgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtaggg
attaagagcacaccagtgactattgttctgccggacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtcaatttttctgatgaggtgacagctggccttcgt
atttcggatggcgttgtgctattcattgatgcggctgagggggtgatgctgaacacagag
aggctgatcaagcacgcagtgcaggaaaggctagcagtgaccgtgtgcatcaacaagata
gaccgactgatcctggagctgaaattgccccctacagatgcttattacaaactcagacat
atcgtagatgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagacccgcaagttcactaaaaaggcc
ccaacgagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacacgaccctgcccaggactctggatgaacttggc
atccacctgaccaaagaggaattgaaattgaacattcggccactcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcatatcccctcc
ccaaaggtgggagccaagacaaaaatcgagcatacctacactggtggcgtcgactctgat
ctcggggaggccatgagtgaatgcgaccctgacggtccgctgatgtgtcacacaacaaaa
atgtacagcacagacgatggtgttcagttccacgcctttggcagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtccttggagaaaactataccctggaggatgaggag
gattcccagatctgtactgtcggacgtctctggatctcagttgcaaggtatcacattgag
gtaaaccgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagactgcaaccgtcacggagcctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtagagccagtcaacccctcggagctc
cccaaaatgttagatggtctccgcaaagttaacaagagttacccctcgcttactactaag
gtggaagagtctggggagcatgtgatcctggggacaggggagctctacctggactgtgtg
atgcacgatctacggaagatgtattcagagattgatatcaaggtcgctgatccagttgtg
acattctgcgagacagtggtggaaacgtcctccctcaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcctctggaaaagggacttgcagaggacatt
gaaaatgaagtggtccagataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttctatctgggcctttgggccagatgccact
ggcccaaacatcctagtagatgatacgctgccctcagaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtacagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaacgtgaagtttaagatcctggatgcagtgattgctcaggagccc
ttgcaccggggtggaggacagatcatcccaacggcccggagagtggtgtattctgctttc
ctgatggccacccctcgcttgatggagccctactactttgtggaggtgcaggctcctgct
gactgtgtgtctgcggtgtacacggtcctggccaggcggagaggccacgtgacacaagat
gctccgatcccgggctctcctctctacaccatcaaagccttcatcccagccattgattca
tttgggtttgagacagacttgaggacccacacgcagggacaagctttctcgctttctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccccagccagccccgcatctggccagagagttcatgatcaagaccaggcgtagg
aagggcttgagtgaagacgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ctggccaagcaagatgttgttctcaactaccccatgtga
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