Harpia harpyja (harpy eagle): 128141042
Help
Entry
128141042 CDS
T10541
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
hhar Harpia harpyja (harpy eagle)
Pathway
hhar03440
Homologous recombination
hhar03460
Fanconi anemia pathway
hhar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128141042 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
128141042 (BRCA1)
03460 Fanconi anemia pathway
128141042 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhar01009
]
128141042 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhar04121
]
128141042 (BRCA1)
03036 Chromosome and associated proteins [BR:
hhar03036
]
128141042 (BRCA1)
03400 DNA repair and recombination proteins [BR:
hhar03400
]
128141042 (BRCA1)
Enzymes [BR:
hhar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128141042 (BRCA1)
Protein phosphatases and associated proteins [BR:
hhar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128141042 (BRCA1)
Ubiquitin system [BR:
hhar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128141042 (BRCA1)
Multi subunit type E3
BRCC complex
128141042 (BRCA1)
Chromosome and associated proteins [BR:
hhar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128141042 (BRCA1)
DNA repair and recombination proteins [BR:
hhar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128141042 (BRCA1)
BRCA1-A complex
128141042 (BRCA1)
BRCA1-B complex
128141042 (BRCA1)
BRCA1-C complex
128141042 (BRCA1)
BRCA complex
128141042 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
128141042 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
BRCT_2
zf-C3HC4_2
zf-RING_2
BRCT_3
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_6
zf-ANAPC11
zf-RING_10
RTT107_BRCT_5
TRAF3_RING
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
128141042
NCBI-ProteinID:
XP_052641542
LinkDB
All DBs
Position
4:complement(86449250..86476819)
Genome browser
AA seq
1867 aa
AA seq
DB search
MAFSVIAIGDVQNVLSAMQKNLECPICLDVVEEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKAEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLNSHHFPKTSTEATAAEF
LCKESSVIQSKGFRNRKKSAKENGQENCTLQEANVDTQLADTGVKRCPLRNKTQKCDSEK
GIYIEFGSDSSEELFKQASNTGLEDKEALQISSQEKPEELKSAEKGNECSCNTQPDKLAA
KEIILPNVIGESDFSKEGLSKKSTRSITEYAKPGQVTTTEYQSSPLSVLAVDLLTEQSDR
IGNASPLRNGDTSFFKNTEEMDAEQTQCNGKSKEFDLKDSSESRLDKSKGIGTVVQSVEA
VEIYEPENDSFHEKELPLEKLLQPGTLHCPTLNQVSRKRLKRSIQKVNEWFSKSNDILSS
NSSQDDSAGATDISGEGDKYLSDKDSCISEKTDPMVDSMEIAVVEGNQRWSKQTADSIKD
KIFGKTYERERKSNPPVSLRDILPTTKKEDMAADEKCLNNSSKDGLKRKRKTVHVLQPED
FIKKKDIEETNGCPQSVNWCLGDKEKKRCDESSAVNENHLSENREDNTLTELEEGGGSIW
KKATEKMTGKHSDGELERNNCDQKSTKKRSSAAKRCRRSTRTMCTLQLVDRNSVSPDPPE
PQIDSYPSSEEPRRGDSEQRQVRRSRRLQLLSEEMTKETGKRVVIKGARKYDSDHEGSFF
GVQRNVLVHTLECQDLCEPQDTLSYKPLANLKGGDLEANEIQISLKNSSDTAETGRSLFN
PTSSCQHSNCSSFAPDAVSQEGEILGSPFLLQSPSMAVVQTASRLTEKVTESRTTFPRDS
AHDKQNVPGNFRTEKLPMAKNVSELTKEAEDSELDTQYLRNIFRHSKRISFSLYPTSMKA
CAVEDAASETLKRSCADQVENKHRKYLKTENLQEEKTTAESLSRVCEKERLKMYESACVS
PVTCFVGNTGYMQTGEHKDDVSQVANQGNLTPLRMDVARTEDKNRSQKGEQGNEKTLSTD
TGIEDELRQNPIKSNRSQSDQDNTEEHIFRRTSLNTVDEICFSSESNQAGKAKVVDGKGP
VLHLQSRSMICPATCQQRPAEFSCEVIGKKGSKRERKQVKGNEEQATQTTSTVMPECLVT
EALEEPLKGNSDFTGLSETPDGLLCFDDDIEENSSFSETDRRERSAVFVKRRDNMLVKEL
HNRNVSSKSRSQCIQRPRRRAQKLQSSDEESSEDEDFPCFQTLIFGKSVSTPLQISKQVT
SVVESSVSPITLPHSGSHDDNNMQKMPEAALSNRCVSPSQESECSVNLFSSQSNVSEESV
DGAQELKKPLIQVHTSKQLSNVNESKEAFQSCNGGLKINKTNFKDECQDDPNMGANLGEA
SGYDSETSNVEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDCAFL
PIHRELPRSSNEGTLEMEQMRQERGAESTSEGNFKNHKCSSSKGFSANYFHIMPSDSLNS
KIKELEKERSPELLLPSSKSCLLKRPDLEKALQCDSILKNKAPSEKTKPVQEAVQKYSQC
QLEAENTDEQKSGTRLNSASVLPNLSGNVTRSPNNTSSSVRLLNPQTAEATNSSVVVQNA
NKSYAQECKSKRSVCFPTSVLYNAAGKENAASPVVSNRKEMSVVASGLNQSEHLMVQKFV
RKTRSTLSNHITEGTTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRIL
DEENFEVRGDVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGA
SVVKQLHLFTHSTNSTAVVVVQPDAWMENTDYRAIQQESNVTMVTREWVLDSVACYECQE
FDAYLVS
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggccttctcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtagaagagccggtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaacttctcagcaaaaagaaaaaaggggtgata
cagtgtcctctgtgtaaggctgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgagggattgttggaaactatccatgcatttgagcttgacactggagta
aagtttttaaacagtcatcactttcctaaaacatccacagaagccactgctgctgagttc
ctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaaaaaaagtgct
aaagaaaatggacaagaaaactgcaccttgcaggaagctaatgtggatacacagcttgca
gataccggggtcaaaaggtgtcccctaagaaacaaaacccagaaatgtgactctgaaaaa
gggatttatatagagtttggctctgattcatctgaagagctttttaaacaggcaagcaat
acagggttagaagacaaagaagcacttcagatttcatctcaagaaaagccagaagaactt
aagagtgctgagaaggggaacgaatgttcttgcaatacacagcctgacaagctggctgct
aaagaaataattctaccaaatgtcataggtgaaagcgatttctcgaaagaaggcttgagc
aagaaaagcactcggagcatcactgaatatgccaaacctggccaagtgactacgactgaa
taccagagttctcctttaagtgttcttgctgtagacctactcacagagcagtctgacaga
ataggtaatgccagtcccttaaggaatggggacacatctttctttaagaacacagaagaa
atggatgcagagcaaactcagtgcaatggtaaaagcaaagagtttgacttaaaagatagc
tcagagagcagattggataaaagcaagggaataggtactgttgtacaaagtgtggaagct
gtggaaatatatgaacctgagaatgattctttccatgaaaaagaacttcctctggagaaa
ctgcttcagccaggaacgcttcactgtcctaccctgaatcaagtctctaggaaaagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaatgacattctgtcttcc
aattcttcgcaggatgattctgctggagcaactgatatttcaggtgaaggagataaatat
ttatcagataaagattcctgtatttcagaaaagactgaccctatggtagattccatggaa
attgcagtggttgaaggaaaccagagatggtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacatacgagagagagaggaagtcaaatccccctgttagcttgaga
gacattttacctactacaaaaaaggaagatatggctgctgatgagaagtgcttgaataat
tccagcaaagatggactaaaacgaaaaaggaagactgtccatgtcctgcaacctgaggat
ttcataaagaaaaaagatatagaagagacaaatgggtgccctcaaagtgttaactggtgc
cttggagacaaggaaaagaaaagatgtgatgaaagttctgctgttaatgagaatcacctc
tctgagaatagagaggataacacactcacagaacttgaggaaggaggaggatctatatgg
aaaaaagctactgaaaagatgactggcaagcacagtgatggggagctagaacggaataac
tgtgatcagaaaagcactaaaaaaagaagttctgcagcaaaaaggtgcaggcgttctact
agaaccatgtgtactctacagttagtggatagaaactctgtttcccctgatccacctgag
ccacagattgatagctatccaagcagtgaagaaccaaggagaggtgattctgagcaaaga
caagtcaggcgcagcaggaggcttcaattactttctgaagaaatgacaaaagaaacagga
aaacgagtagtaattaagggagcaagaaagtatgacagtgaccatgaagggtctttcttt
ggagtccaaaggaatgtgttagttcacactttggaatgccaagacttgtgtgagccccag
gatacgttgagttacaagccactcgctaatctgaagggtggtgatctggaagcaaatgaa
atacagattagtctaaagaattcatctgacactgcagaaactggaagaagtctcttcaat
cctacatcttcatgtcagcattcaaactgtagttcctttgcacctgatgcagtttctcaa
gaaggtgaaatactaggtagccctttcctcctgcagtctccttcaatggctgttgtgcaa
actgcttcccgcctgactgaaaaggtgactgaatcacgtactacgtttcccagggatagt
gcacatgataaacaaaatgttccagggaactttagaactgaaaagttgccaatggctaaa
aatgtttcagaattgaccaaggaagctgaagatagtgagttagacacacagtatctgcga
aatatatttaggcattcaaaacgcatatcatttagcctttatcctacttcgatgaaggcg
tgtgcagtagaagatgctgcttctgaaactttaaagagatcatgtgctgatcaggtagaa
aataagcatagaaaatatttaaaaacagaaaacttgcaagaagagaaaacaactgctgaa
agcttgagtagggtttgtgagaaagagaggcttaagatgtatgaatctgcttgtgttagt
cctgtgacttgctttgtcggcaacactggatatatgcagacaggggaacataaagatgat
gtttcacaggttgcaaatcaagggaatctgacaccattaagaatggatgttgctaggact
gaagacaaaaacagatcgcaaaaaggagagcagggaaatgaaaagacactgtcaactgac
acagggatagaagatgagttgagacagaatccaatcaaaagtaatagaagccaaagtgat
caggataatacagaagagcacattttcagaagaaccagtttaaacacagtcgatgaaata
tgcttcagttcagaaagcaatcaagcaggaaaggccaaagttgttgatggaaaaggacca
gtactacatcttcagtccaggtcaatgatttgtcctgcaacttgtcagcaaaggcctgct
gaattcagctgtgaagtcattgggaaaaaaggtagcaaaagagaaagaaaacaagtaaag
gggaatgaagaacaagcaacccaaaccactagcacagtgatgcctgagtgtttagttaca
gaggctctagaagaacctcttaaagggaatagtgattttacaggtttgtctgaaacccct
gatggcttactgtgctttgatgatgatattgaagagaacagcagcttttctgaaactgat
aggagagagagatctgctgtgtttgtaaaaagacgagacaatatgctggtaaaagaacta
cacaatagaaatgttagttctaagtcaaggtctcagtgtattcaaagacctcgaagaaga
gcgcagaaactgcaatcttcagatgaagaatctagtgaggatgaagatttcccatgtttt
cagacattaatatttggcaaatcagtaagcacacctttgcagatcagtaagcaagtgaca
tctgtggtagagtcttcagtaagtcccatcacattgcctcacagtggaagtcatgatgac
aataatatgcagaaaatgcctgaagccgccctaagtaataggtgtgtttcaccaagccag
gagtcagaatgctcagtcaacttattttcttcccagtccaacgtgtctgaagaatcagtt
gatggagcacaagagctgaagaaacctttaatacaagttcatacatccaaacaattgagc
aatgtgaatgagagtaaagaagcttttcagagttgtaatggagggctgaagataaacaaa
actaacttcaaagatgaatgccaagacgacccaaacatgggagcaaacctaggtgaagca
tctggatatgacagtgaaacaagtaatgtagaagattcgtgtggaccattctctcagggt
gaaatccttactacacagcagaagaatgctatgcaaaataacctaaaaaaacttcagcaa
gaaatggctgtacttgaagcagtgctaaagcagcatggaagtcaggactgtgcgttttta
cctatccatagggaactgccacgttccagtaatgaaggaacactcgaaatggaacaaatg
agacaagaaagaggggcagagtcaacctcagaaggaaatttcaaaaatcataaatgcagc
agttcaaagggattttcagccaattatttccatattatgccaagtgattctctcaacagt
aaaatcaaggagttagaaaaagaaaggtctccggaattgttgcttccatcttctaaatcc
tgtttgttaaagagaccagatttggagaaagcccttcagtgtgacagtattctgaagaac
aaagctccttctgaaaagacaaaacctgtgcaggaagcagtacaaaaatatagtcagtgt
cagcttgaagcagaaaacacagatgaacagaaatctgggaccaggctaaacagtgcatct
gtcttaccaaatctctctggaaatgtgaccaggagtccaaataacacttcctcctcagta
agacttcttaaccctcaaactgcagaagccacaaatagttctgttgtagttcagaacgct
aataaaagctatgctcaagaatgtaaatcgaagaggagtgtgtgttttcctacatctgtt
ctgtacaatgcagctgggaaagaaaatgctgcaagtccagttgtgagtaacaggaaagaa
atgtctgttgtggcttcaggtctaaatcaaagtgaacatttgatggtccagaagtttgtg
agaaaaactcggagcactttatctaatcacattactgaaggaacaacccatgtcataatg
aaaacagataaggagctggtgtgtgaacggacactgaagtactttctgggtattgcagga
agaaaatgggtagttagttatcagtgggtaattcagtcctttaaagaaggaaggatactg
gatgaggagaactttgaagttagaggagatgtaatcaatgggagaaaccaccaaggtcct
aagagggctaggcagtctctgactgaaaagatctttaaagactttgagatctgttgctat
ggacctttcactgatatgactacagaacatctagaatggatggtggagctttgtggtgcc
tctgtcgtgaagcaacttcatctgttcacacactcaacaaattctactgctgttgtggtt
gtgcagccagatgcttggatggaaaacactgattatagagcaatccagcaagagagcaat
gttaccatggtgactcgagagtgggtattagacagtgttgcttgctatgagtgccaggag
tttgatgcttaccttgtgtcctaa
DBGET
integrated database retrieval system
