Hippoglossus hippoglossus (Atlantic halibut): 117752369
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Entry
117752369 CDS
T07778
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03440
Homologous recombination
hhip03460
Fanconi anemia pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117752369
09124 Replication and repair
03440 Homologous recombination
117752369
03460 Fanconi anemia pathway
117752369
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117752369
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117752369
03036 Chromosome and associated proteins [BR:
hhip03036
]
117752369
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117752369
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117752369
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117752369
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117752369
Multi subunit type E3
BRCC complex
117752369
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117752369
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117752369
BRCA1-A complex
117752369
BRCA1-B complex
117752369
BRCA1-C complex
117752369
BRCA complex
117752369
FA (Fanconi anemia) pathway
Downstream FA components
117752369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_4
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-Nse
RTT107_BRCT_5
zf-RING_5
zf-RING_4
zf-MIZ
zf-ANAPC11
zf-RING_6
zf-PARP
PTCB-BRCT
zf-RING_10
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
117752369
NCBI-ProteinID:
XP_034425470
LinkDB
All DBs
Position
19:6785371..6803860
Genome browser
AA seq
1399 aa
AA seq
DB search
METPKASDVKKGISVLWETLQCPICLDLLTIPVSTKCDHQFCKFCIMKLVDNSKQNRANC
PVCKTKITKRSLQVSPGFQRLVAGLQDMIQAYEHDTGTNYFTGMSLQEKQLGVTDAEAIK
PPQNLSSGETAHTDLDYVENEDQDDLPRSHSSTIEAQNGFARLMELEDSTPLTTEHEGLD
SGLGEALPTSDKKLHSSADNLEPVETEMLETVEKASTHKTRGKLRSVKLESASLLPVAIP
DETEYQPLRKSSRKKQKTDLESAKILERRRKKSLEKVAEWLMKVPPEGSLELEKPDKDPD
DSDGCSSTSTIDVKQHLSDINSKREDRAKALEDHVFGAVYKRDRRGKRNSSRSLFVEPTI
IKHKTDSEDENRSDSEEEQLLTEDVNDSSDILKKAEQMEDLEENDVVGKDVIAEAESEPQ
QLKRKSKKRMQNALQQVDSDLKEQAEAKSDKTEPKKPDRRKGKNTRSEKGKSARVSKPLV
LVGVKNGETNPKTRVKSEEVQVQIENYPSSEDQQTPIMRSTRRSRRLQLFAEEVQDGHKK
ANSRANVIEKDVNVTQQQEEVEGETPDKAESPKGGKLAKRNGCVYDEDLGGIENVESGKR
THREQESIAEVQNLPNAETLSEATGPCSVPVVPSSPCPTEATVVGPTLENNNPTDQSSKN
IELKTSVCVITEKEEEKNDSELDTEQLLQSFKATKRKSFRLCGPKGKRSRTSVHENTQGA
EGEENDFVCSRVESAKTQTNKKTSGIIDQEALKDDENSLCSDLISPSISPILTRKSVEKP
DQVVVEALNPVTSSSGQDGPAGNCLSRNSQSSALTPNQVSKREIESPQFVESGLRFTDVE
HEEVNEASKSSQIPNGQRDCSLKDAGKWKEMKWKEMRDSISQKHSDNTAERILVAESSLT
PDGLVTPLVLTVHGSGELSAHSPIKSNLRNKRRTQRLESSSESDESREELPTLTQIFGTS
AHPAAVTRDRGDSSEATGCEAACVPADAAERLSRPPACPSPDCANSSQGSVDLFGTPDEC
DAPVNENIDMESSQFSSEVLVTQQKIQMQKELVRLEKLMALVSEVLHEKEQSPAKEMNPS
SKTTGPDTQEPLPCNQDACQDSDQKGVPEAEREPGTRASDGREVTESSVSKPVGVTQTTV
QCSTHTALSVKGTDASKTPVLSSAAKTLKSSNSPSDGQEDKENTTPPKDRTKAKLVLVSS
GLGPNEQIIVKKFAKRVGARVISQVTEEVTHIVMRTDEQLVCERTLKYFLGIAGRKWVVS
FQWISECFKQKKLLDESVFEVKGDVVNGPNHQGPSRARTTADSNLLMSGYSICFQGPFTD
MTTDEMEWMVELCGAAVVTDPLLLDSKQKSRQLVIVQPGPESSSSTFSRLLRQASVVTRG
WLLDTVATYTLQNLNNYSP
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccaaaggcctcagatgttaaaaaggggatctcagtcctttgggagactctg
cagtgtccgatatgcttggatttattgacgataccggtatctaccaagtgtgaccaccag
ttttgcaaattttgcataatgaaacttgtggacaactccaaacaaaaccgggccaactgt
ccagtgtgcaaaaccaagataaccaaaaggagtttgcaggtgagccctgggtttcagaga
cttgttgcaggactgcaggacatgatacaagcatatgaacatgacactggcacaaactat
ttcactggaatgtccctgcaagaaaaacagttaggtgtcacagatgcggaagccatcaaa
cctcctcaaaatttgtcatctggagaaacagcccacactgacctggactatgtggaaaac
gaagaccaagatgatcttccaaggtcccattcttcaactatagaagcccagaatggattt
gcaagactcatggaacttgaagactcgactcctttgactacagaacacgaaggcctggac
agcggccttggggaggctttgccgacgtctgacaagaaactgcacagctctgcagataat
ttggaaccagtagaaacagaaatgttagaaactgtggaaaaggcatcaacacataaaact
agaggcaaacttagatctgttaaattggagagtgcctcccttcttccggtagcaattcct
gatgagacagaatatcagcctttaagaaagtcttcgcggaagaagcagaaaacggatctg
gagtccgccaagattcttgagcggagacggaagaaaagtcttgaaaaagttgcagagtgg
ctgatgaaagttccacctgagggaagtctcgaattagaaaaaccagacaaagacccagat
gactctgatggctgttcttccacctctacaatagatgtaaagcaacaccttagcgatatt
aattctaagagagaggatcgtgccaaagcactcgaagaccatgtgttcggagccgtctac
aaacgagacagaagagggaagaggaacagctctcgttcactttttgttgagccaacaatc
ataaaacacaaaacagactctgaggatgaaaaccgaagcgactcagaggaagaacaactg
ctaacagaagacgtaaatgatagcagtgacattttaaaaaaagcagaacagatggaagac
ttggaggaaaatgatgttgttggcaaagatgtgattgctgaggcggagtctgaaccacaa
caactaaaaagaaagtcaaagaaaagaatgcaaaacgctctgcagcaggttgacagtgat
ttaaaggagcaagctgaggcaaagtcagacaaaactgagccaaagaagcctgacaggagg
aaaggtaaaaacacaaggtcagaaaaaggcaagtctgcaagagtgtcgaagccccttgtt
ctcgttggagttaaaaatggagaaaccaatccaaagactagagtgaagtcagaagaagtt
caggtacaaattgagaattatcccagcagcgaggaccaacaaacccccatcatgaggagc
accaggagaagcagaaggcttcagctctttgctgaggaagtccaggacggtcacaagaaa
gcaaactcgagagctaatgtaattgaaaaagatgtcaatgtcactcagcagcaggaggaa
gttgaaggtgaaacaccggataaagcagaatcacctaagggtggaaagttggccaaaaga
aatggatgtgtttatgatgaagatttaggaggaattgaaaacgtggagtctggtaagaga
actcaccgagaacaagagtccattgctgaagtgcagaatttgccgaatgctgaaacgctc
tctgaagctactggaccttgttctgtcccagtggtcccaagttctccatgtccaacggaa
gcaactgtggttggtccaacacttgaaaataacaatccgactgatcaatcctcaaaaaac
attgagttgaaaacatcagtttgcgtgataacggagaaagaggaggaaaagaacgacagc
gagcttgacacagaacaactgctccagagcttcaaagccacgaagaggaaatctttccgt
ctctgtggtccgaaagggaaaaggagccgtacctcagtccatgaaaacacacaaggtgct
gaaggagaggaaaatgactttgtttgttctagagttgaatctgcaaaaacacagacgaac
aagaaaacatctggaattatcgaccaggaggcactaaaagacgatgaaaactcattgtgt
agtgacttgatttctccttctatctcaccaatactgacaagaaaatcagttgagaaacca
gatcaagtggtggttgaagccttgaaccctgtcaccagtagttcaggtcaggacggtcct
gctggtaactgtctttccaggaacagtcagagcagcgccctcactcctaatcaagtctca
aaacgtgaaattgaaagtcctcagttcgtagaatccgggctccgcttcacagatgttgag
cacgaggaggtaaacgaagcctcgaagagctctcaaatcccaaacggtcagcgtgattgt
tcattgaaggatgctgggaaatggaaggagatgaaatggaaggagatgagagacagcatt
tctcaaaaacattcagacaacacggctgaacgtatcttagttgctgagtcttctttaact
cctgacggcctggtgacaccacttgtcctaacggtccatggaagcggagagctcagcgca
cactcccccatcaagagcaacctgaggaacaagagaaggactcagaggctggagtcttca
tctgagtcagatgaatccagagaggaattacctacgttgactcaaatctttggaacgtca
gctcatccggctgctgtgacccgggatcgaggagactccagtgaagccactggatgtgag
gctgcatgtgttccagctgatgcagcagaacggttgagccgtccgcctgcatgccccagc
cccgactgtgctaactccagccaggggtctgtggacttgttcggaacgccagatgaatgt
gatgctccagtaaatgaaaacattgacatggagtcatcacaattttcaagtgaggtcctt
gtcacacagcaaaagatacagatgcagaaggagctggtgaggctggagaagctgatggct
ctggtgtcagaggtgcttcatgagaaagagcaaagtcctgcgaaagagatgaatcccagc
agcaaaaccaccggcccagacacccaggaacccctcccgtgtaaccaggatgcatgccaa
gattcagaccagaaaggcgttccagaggcagagcgagagcccggcacaagagcatctgat
ggcagagaggtcactgagtccagcgtgtcaaagcctgtcggcgttacacagacgacagtg
cagtgctccacacacacagcgctgagtgtaaagggcactgacgcctccaagacgcctgtt
ttaagctcagcagccaagacactgaagagcagtaattcaccatcggatggacaagaagac
aaagaaaacaccactcctccaaaagacagaactaaagccaagctggtgcttgtgtcgtct
ggattagggcccaatgaacagataattgtgaaaaagtttgccaagcgagtcggggctcgt
gtgatttcccaggtgacagaggaggtcacacacatcgtcatgcgcacagatgaacagctg
gtgtgcgagcgcacgctgaagtacttccttggcatcgcgggcaggaagtgggtcgtgagc
ttccagtggatttcagagtgcttcaaacaaaagaaactcctagatgagagtgtctttgaa
gtgaaaggcgacgtagtgaacggaccgaaccaccagggcccttcaagagctcgaaccact
gcagacagtaatctgctcatgagcggctacagcatctgcttccaggggcctttcacagac
atgactacagatgaaatggagtggatggtggagctctgtggagcagctgtagttacagat
ccacttctcctagacagtaaacagaagtcccgtcagctggtcattgtacagcctggacct
gagtcatcatcgtccaccttcagccgtctcctcagacaggcgagtgtggtgacacgtggt
tggctcttggacacagtggcaacctacaccctccaaaacctcaacaactactcgccatga
DBGET
integrated database retrieval system
