Hippoglossus hippoglossus (Atlantic halibut): 117752504
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Entry
117752504 CDS
T07778
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00514
Other types of O-glycan biosynthesis
hhip04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117752504 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117752504 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hhip01003
]
117752504 (rfng)
Enzymes [BR:
hhip01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117752504 (rfng)
Glycosyltransferases [BR:
hhip01003
]
Glycan extension
O-Glycan
117752504 (rfng)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
117752504
NCBI-ProteinID:
XP_034425744
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All DBs
Position
19:18254568..18267891
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AA seq
408 aa
AA seq
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MNLLPRPVRMHIASVGVSKFCFLFSLAFCGLLLLLIPAFQPPARQVDLPQPRPQIRPTHA
GSSHHTRVPAVSVHAGGTDKATGLNGSSLGQGETMEMEVTGGDKRGVDSPKSLERGAFPA
RKAGGPLGSTSHDPLELKDIFIAVKTTKKYHKSRLELLIHTWVSQAKEHTFMFTDGEDNE
LRMRTGANIINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLRVL
SSYHHSQDVYLGRPSLDHPIEASERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWAS
LGNFISTAEKIRLPDDCTIGYIIEALLEVSLTHTHLFHSHLENLQKLPIDSVLEQVTLSY
GGFENRRNVVSIVGGFSLAEDPTRFKTVHCHLYPFTDWCPKIKPRHTN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctccctcggccagtcaggatgcacatagcttcagtgggtgtcagcaagttc
tgcttcctgttctcccttgcattctgtgggctcttgcttctgttaatcccggccttccag
cccccagctcgccaggtggacctgcctcagccccgacctcaaatcagacccacacatgca
ggctcatcacaccacaccagggtaccagcagtgtctgtccatgctgggggaactgacaaa
gccacagggctaaatggaagctcattgggccagggggaaaccatggagatggaagttacc
gggggtgataagagaggggtggactccccaaaaagccttgaaagaggggcttttcctgca
cgaaaagctggtggacctttaggatctacatcccatgacccattagagttgaaggacatt
tttattgctgtgaaaactaccaagaagtaccacaagtcccgactggagctgctaattcac
acctgggtttcccaagctaaagaacataccttcatgttcactgatggtgaggacaacgag
ctgcggatgagaacaggagccaacatcatcaacacaaactgctcagcagctcacacccgc
caggctttgtgctgcaagatgtctgtggagtacgacaaattcattgagtctcagaaaaag
tggttctgccatgtggatgatgataactatgtgattctgcccagcttgttgcgggtgctc
tcctcctaccaccacagccaggatgtctacctgggccggcccagtctggatcaccctata
gaggcttcagagagagtcaagagtgacggatcagtgtcggttaagttctggttcgctaca
ggtggagcaggtttctgtatcagcagaggtctggcactgaaaatgagcccctgggccagt
ttagggaatttcatcagcacagcagagaagatccgactcccagacgactgcaccatcggc
tacatcattgaggcgctgctggaggtctccctaacacacacacacctcttccattctcac
ctggagaacttgcagaagctgcccattgactctgtcctggagcaggtgactctcagctac
ggagggtttgagaacagaagaaatgtggtcagtattgttggaggattttcactggctgaa
gatcccacaaggtttaagacagtccactgccatctgtacccatttactgactggtgtcca
aagatcaaacctcgccacacaaactga
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