Hippoglossus hippoglossus (Atlantic halibut): 117754110
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Entry
117754110 CDS
T07778
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117754110 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hhip04050
]
117754110 (tnfrsf11a)
04090 CD molecules [BR:
hhip04090
]
117754110 (tnfrsf11a)
Cytokine receptors [BR:
hhip04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117754110 (tnfrsf11a)
CD molecules [BR:
hhip04090
]
Proteins
117754110 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
117754110
NCBI-ProteinID:
XP_034428691
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All DBs
Position
20:9241506..9255660
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AA seq
654 aa
AA seq
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MRLNFSTSWIFRGWITCALVAFYAQDVVSKTLPCDETHYVRGTRCCKKCGPGFRMLAACT
DSQKTKCIKCNRGEYQPGWTEEDRCLQQKFCDPIKGFMERPENTVAEEPCRCLPHLQCYP
INCEFCERIPTCSAGYGLEVDPDSTNGRKVCVACKKGCFSADNNGEQCKQWTNCKAEGRT
ETHPGSAQADAACGLPVSGATPSWVIVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRSC
VQNLKSTRIQQDTLDPLYHSGGPKCTPCEITKLVYQAPHNPTDEPLCTFPTSAPDVKVSL
PFTGEMTESVATNGKMVTEDQSEGSGEPEEVSEEEEVASVPPLLAGSCVCVIPVREPLEV
GENEDCSQAVSPGTPGTCSCGGLDGERDGDESGKEERSESGEKGNGNQEKMVLCKSETAA
ASLVSLSPPLLHSSSVVPPSSPRPELCLPLSQALVSPEFKPNMTDRSPLKQEELYRLAST
DTTSAENSTTSAMTSVSPLMTSSSVRDLYLDKPPEASGPEQGQGLSWENNSTNKLSCGES
ELQCSPESLHSQLAEPTLTSGQVSGNNNTTFISSGQVMNFSGDVIVVYVSQTSVGSDGAG
LDDAFRSPVQEEANETAPFLQRAARSRGDCLSRVTVQDETLPVQEVMAERPPGK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaacttttctacgagttggatattccgaggctggataacgtgtgcgctcgtc
gccttttacgcacaggatgtggtatccaaaactttaccttgtgatgagactcattacgta
agaggcaccagatgctgcaagaagtgtgggccaggcttccgtatgctcgctgcctgcact
gactctcaaaagacgaaatgtataaagtgcaatcgcggtgaataccaacccggctggacc
gaagaggaccgctgtctccagcagaagttctgtgacccgattaagggattcatggagagg
cctgagaacactgtggcagaggagccgtgccgctgcctcccccacctccagtgctacccc
atcaactgtgagttctgtgagaggattcccacctgcagtgccggatatggcctcgaggtg
gatcccgactccacgaacggaaggaaggtctgtgtggcatgtaagaaaggctgcttctct
gctgacaacaacggagaacaatgcaaacaatggactaactgtaaggccgagggcaggact
gagacacatccaggcagcgctcaggcagatgcagcatgtggactccctgtgtctggtgcc
acgccctcctgggtcatagtttcagttctgtcagtcatcaccgttctgtgtctcctcatc
ctgctgcttttctgctacaaggacaaactgaagttactctctgtaaatctgcgatcgtgt
gttcagaatctgaagagtacaaggatacagcaggataccttggaccctctttaccacagt
gggggtcctaagtgtacaccgtgtgagatcaccaaactcgtctaccaagcaccacacaac
ccaacagacgagcccctctgcacattccccacctctgctcctgacgtcaaggtctcgctg
cccttcaccggggaaatgacagaaagcgtagcaaccaatgggaagatggtgacggaggat
cagagcgaagggtctggagagccggaggaggtgtcagaggaggaggaggtcgccagcgtg
ccccctctcttggcgggttcctgcgtgtgcgtcatccctgttcgcgagccactggaagtc
ggggagaacgaggactgcagccaggccgtctcccccgggactccaggaacatgctcgtgt
ggagggctggatggagagagggatggagatgagagcgggaaagaagagaggagtgagagc
ggggagaagggcaacgggaatcaagaaaagatggttttgtgcaagagtgaaacggctgct
gcgtccctcgtgtctctctctcctccactcctccacagctcctctgtcgtccctccatcc
agcccacgtcctgaactctgcctgcctctgtcccaggctctggtgtcgccagagttcaaa
cccaacatgaccgacaggtcaccgctgaaacaggaggagttatacagactggcgagcaca
gacaccacctcagcagagaatagcacaacctctgcgatgacctcagtcagtcccctgatg
acgtcctcgtctgttagagatctgtacctggacaaaccccccgaggcctctggcccggag
caaggccagggtctttcctgggagaataacagtacaaacaagctctcgtgtggggagtca
gaactgcagtgctctcctgagagcctccatagtcagctggcggaaccaacgcttacctca
ggtcaggtgtcggggaacaacaacaccaccttcatctccagcggtcaggtgatgaacttc
agcggcgacgtcatcgtcgtctacgtcagccagacgtcggtcggcagcgacggagcgggg
ctggacgatgccttccgaagccccgtccaggaagaggccaacgagacggctccgttttta
cagcgcgctgcgaggtcgagaggggattgcttgtctcgcgtcacggtgcaagacgagacg
ctgccggtgcaagaagtgatggccgagcggccgccggggaagtga
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