KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117754426
Entry
117754426         CDS       T07778                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117754426 (kdm6a)
Enzymes [BR:hhip01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     117754426 (kdm6a)
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     117754426 (kdm6a)
   Histone demethylases
    117754426 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC TPR_1 KDM6_GATAL TPR_2 TPR_8 TPR_17 TPR_12 TPR_16 TPR_11 TPR_14 TPR_19 TPR_CcmH_CycH TPR_9 TPR_7 ANAPC3
Other DBs
NCBI-GeneID: 117754426
NCBI-ProteinID: XP_034429128
LinkDB
Position
21:1276045..1309471
AA seq 1458 aa
MKSCGVSPPAAAAASAAARSLGVAGNDEEKMASGKATEIEEDFPKLTAPEKRSLAGVDSS
LFGFHGLQEDGARTKALLLKAVSCYDALILKAEGKVDPDIFCQLGHFNLLLEDYQKALSA
YQRYFSLQSDYWKNAAFLYGLGMVYFHFNASQWSIKAFQEVLYIDPSFSRAKEIHLRLGL
MFKVNTDYESSLKHFQLALIDSNLCTLSKAEIQFHIAHLYEIQKKYRAAKEAYESLLQTE
NLPAQVKATTLQQLGWMHHTVEQLGDKGTKDSYAIQCLQKSLEADPNSGQSWYFLGRCYS
SIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAW
MDLGTLYESCGQPHDAIKCYLNATRSRACLNTAALTQRIKLLQAQLCNLQPGSLQNKSKM
LPSIEEAWSLPIPAELTSRQGALNTAQAQQACKGEGGQSASNHTDPQASPAKRKRTASPA
KSVADSWANSTSQQPIPSWYLTPQKLQLLDHLRTNRANLKPPQVQMLEQLENQFTLMQQH
QQQARQQAAAGGQPRPSLPNGPSADPSHHHADLPRASPLNHTAPPATANGSCSSSPSVGP
LGHLDRNHTLGLGGGGASNGNVPYPQQNSLPHNCTAASHPSTSSTTSSPSHADETWRSQQ
RNTTTQGLQKGPGSHSAGPNGEPPFSSSSSSPQTSFSSSGILNQVGHSSGLCTASSSASS
LSPTSPQTTPNHFSSPPHSATTSGVHTKDTTPSGGSNGSSTSAATVPSGPEAAVRHSAGT
PLSPSTTPAQGLTNHVQPRVTDSSTGPSQPGSPAPGVLSSDNPQLSALLKGKANTTSNDD
NNNYSNHGGPSSEKINNVHPGLHGAAKKTSELSAASSPPSATATPSPRSADPHATNSLSC
LNSPSATNSQGPTLNGTGLEDSQSPVKVEPPGGAHKHSTPAGLAPWSSFSIYPSSSEVLK
ACRYLGKNGLSTNSVLLDKCPPPRPPRPPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQ
FCTNPSNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLAQPNDENWDPSGSR
KMWRCESSRSHTTIIKYAQYQASSFQESLREENEKKKEIEAEAGSSDSAMRRRKGQFKHL
KFGTNIDLSDEKKWKQQLQELAKLPAFSRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSR
TPGHQENNNFCSVNINIGPGDCEWFAVPEPYWGVINDFCEKNNINFLMGSWWPNLEDLYE
TNVPVYRFIQRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTAHQYKLAVERYEWNKLQ
SVKSIVPMIHLSWNMARNIKVSDHRLFEMIKYCLLRTLKQCQMQRELLLAAGKELVWHGR
TQNEPAHYCSICEVEVFDLLFVTSESNSRKTYVVHCQDCARRGSTNLDNFVVLEQYKNDD
LMQVYDQFTLASPLPSSS
NT seq 4377 nt   +upstreamnt  +downstreamnt
atgaagtcgtgcggagtgtcgccgcccgccgccgccgccgcctccgccgctgcccggagt
ctcggcgttgctggtaatgacgaggagaaaatggcgtcgggaaaagcgaccgaaatcgaa
gaggactttccgaagctaacagcgccggagaagcggagcctggccggggtggacagttca
ctgtttggatttcacgggcttcaagaagatggcgccagaacgaaggccttgctgttaaag
gctgttagctgctatgatgccctcatcctgaaagcagaggggaaagtggaccctgacatt
ttctgtcagctgggtcacttcaacctcctgctggaggattatcaaaaagcattatctgct
taccagaggtacttcagtttacagtcggactactggaagaatgctgcctttttatacggc
ctcggcatggtttacttccatttcaacgcttctcagtggtcaatcaaggcgttccaggag
gtgctgtacatcgaccccagcttctccagagctaaagagattcatctgaggctgggactc
atgtttaaagtcaacacagactatgagtcgagcttaaagcattttcagctggctttgatc
gactccaatctctgcactttgtccaaagctgaaattcagtttcacattgctcatttgtat
gagatccagaagaaatacagagcggcgaaagaagcgtatgaaagtctgttgcagacggaa
aatcttcctgcgcaggtgaaggcgacaacactgcaacaactgggctggatgcatcacacg
gtggagcagctcggggataaaggcaccaaggacagctatgctatccagtgtctgcagaag
tctttagaagccgacccgaactctggccagtcctggtactttctcggcaggtgctactcc
agtattgggaaggtgcaggatgccttcatctcttaccgccagtccattgacaagtcggag
gccagtgctgacacgtggtgctccataggggtgctgtaccagcagcagaaccagcctatg
gatgcactgcaggcctacatctgcgctgttcaactggaccatagccacgccgctgcctgg
atggacctgggcacgctgtatgaatcctgcggccagccgcacgacgctatcaagtgctac
ctgaacgccacgcgcagcagggcctgcctcaacacggccgcactcacacaacgcatcaaa
ctgctgcaggctcagttgtgtaacctacagccaggtagtctgcagaataagagtaaaatg
cttcctagtattgaggaggcatggagcctacccattcctgctgagctcacgtccaggcag
ggggccttgaacactgcacaggcacagcaggcctgcaagggggagggaggccagtcggcc
agtaatcacacagacccacaggccagcccagccaagaggaagcgcactgccagcccagcg
aagagtgtcgcagactcgtgggccaacagcaccagtcaacagccgatccccagctggtac
ctgacgccacagaagctccagctcctggatcacctgcggaccaaccgagcgaacctcaag
cccccccaggtgcagatgctggaacagctggagaaccagttcactctcatgcagcaacat
cagcagcaggcgaggcagcaggcggcggcgggtggccagccgcggcccagcctccccaac
ggcccgtcggccgatccctctcaccaccacgcagacctcccccgcgcctcccctctcaac
cacacggcccccccggccacagccaacggatcctgctcttcaagtccgtcggtggggccg
ctgggacacctggacagaaatcacaccctgggacttggaggtggcggcgcgagcaacgga
aacgtgccttacccgcagcagaactctctacctcacaactgcacagccgccagtcacccc
agcaccagcagcactaccagtagtcccagtcacgcagacgagacatggaggagccagcag
cgcaacactaccactcaggggcttcaaaaaggtccaggttcacattcggcgggtcccaat
ggagaaccccctttctcttcctcctcctcctcccctcagacctcgttctcttcctctggc
attctgaatcaggttggacattcctctgggctctgcactgcctcctcctcagcctcctcg
ttgtcccccacctccccccagaccacacccaaccacttttcctcgcctccccactccgct
actacctcaggggtccacaccaaagacaccacgccttcagggggcagcaacggcagcagc
acctccgctgctactgtgccatcaggtccggaggccgccgtcaggcattctgcagggaca
cctcttagtcccagcacaacccccgcgcagggattgactaatcacgtccagccgcgggtg
acggacagctccaccggcccgtctcagcctggctctcctgcccccggcgtgctcagttca
gacaatcctcagctctcagccttgctaaagggaaaagccaatactaccagtaatgacgac
aacaataactacagtaaccacggagggccttcctcagagaaaatcaacaacgtccacccg
ggtctccacggtgccgccaagaagacatcggagctttcagcggcatcctcgccaccgtcg
gccactgctacaccctctcctcgctctgcagaccctcacgccaccaacagcctctcctgc
cttaacagcccgtccgccaccaacagccaggggcccacgctcaatgggacggggctggag
gactcccagagccccgtgaaggtggagcctcctggaggagctcataaacacagcacccct
gctggtctggcaccctggtcctcgttctccatctaccccagctccagtgaagtcctcaaa
gcctgcaggtacctggggaagaacggcctgtcgacgaacagcgtcctcctggacaagtgt
cccccgccgcgtccccctcgcccgccgtctcctccgctgccaaaggacaaactcaaccct
ccgacgcccagtatatatctcgaaaacaagcgggacgccttcttcccgccgctccatcag
ttctgcaccaacccctcgaacccagtcaccgtcatcagaggcctggccggagctctcaaa
ctggacttgggcctgttctccaccaagacgttggtggaggccaaccccgaccatctggtg
gaggtgcggacccagttagctcagcccaacgatgagaactgggaccccagcggcagcagg
aagatgtggcgctgcgagagcagccgctcgcacaccaccatcatcaaatacgcccagtac
caggcctcgtctttccaggagtctctacgggaggagaacgagaagaagaaggagattgaa
gcagaggcaggttcctcagacagtgcgatgcggcggcggaaaggtcagttcaaacacctc
aagtttggcaccaacatcgacctctcggatgaaaagaagtggaaacagcagcttcaggag
ctggcgaagcttccggcgttttcccgggtggtgtcggccggtaacctgctcagccacgtg
ggtcacaccatcctgggcatgaacaccgtgcagctctacatgaaggtgccagggagccgg
acgccaggtcatcaagagaacaacaacttctgctcggtcaacatcaacatcggtcctggt
gactgtgagtggttcgctgtgcccgaaccctactggggcgtcatcaacgacttctgtgaa
aagaacaacatcaacttcctgatgggttcttggtggccgaacctggaggacctgtacgag
accaacgtgcccgtctatcgcttcatccagcgtccaggagacctggtgtggctcaacacc
ggcaccgtccactgggttcaggccatcggctggtgcaacaacatcgcctggaacgtcggg
cccctcacagctcatcagtacaaactggccgtggagcgttacgagtggaacaagctgcag
agcgtcaagtccatcgttcccatgatccacctctcctggaacatggcccggaacatcaaa
gtgtccgaccaccggctctttgagatgatcaagtattgtttgttacggactctgaagcag
tgtcagatgcagcgggaactgctattggctgctgggaaggaactggtttggcacgggagg
acgcagaacgagccggcgcactactgcagcatctgcgaggtggaggtgttcgacctcctg
ttcgtcaccagcgagagcaacagcaggaagacgtacgtggtgcactgccaggactgcgcc
cgcagggggagcactaacctggacaactttgtggtgctggagcagtacaagaacgatgac
ctcatgcaggtttacgaccagttcacactcgcgagccccctcccttcttcctcttga

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