Hippoglossus hippoglossus (Atlantic halibut): 117755976
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Entry
117755976 CDS
T07778
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04620
Toll-like receptor signaling pathway
hhip04621
NOD-like receptor signaling pathway
hhip04622
RIG-I-like receptor signaling pathway
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117755976 (traf3)
04621 NOD-like receptor signaling pathway
117755976 (traf3)
04622 RIG-I-like receptor signaling pathway
117755976 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117755976 (traf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
zf-TRAF_2
zf-RING_UBOX
Crescentin
Sina_ZnF
zf-C3HC4_4
Fzo_mitofusin
Fez1
DUF4201
MctB
zf-RING_6
FlaC_arch
5_nucleotid
Motif
Other DBs
NCBI-GeneID:
117755976
NCBI-ProteinID:
XP_034432106
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Position
22:complement(98516..110782)
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AA seq
615 aa
AA seq
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MIGFGAALFSRSLKVGHLQMVMSAGRSADGREVQIPLQQVAPSVAASLAVVSPITPPSHR
PANPWPPSDPAASHGVAAGFLPLHEGFRDHFVETPEAKYCCEVCRLVLCQPRQTECGHRF
CQSCINHIFSQSNPVCPADMEQLFKDKIFRDVCCQREIMALKVYCRSEANGCQELMSLHQ
IPDHLNVCPFFEVPCPLGKCKERMMRKEIPDHLSWKCKHRETTCEFCITKMPLTDLQKHK
ETVCPAFPVSCPNHCSSSSLPRSELSSHQHDCPKAQVICQFHRYGCTFKGLNQEMRQHES
TCAAEHLRMMANRNSSLENKVEEVKGELLERYKVLPALSSRLSDLENQNDELRDKNRQME
QKFSTMQKLMSSHSEKLLEVELELRSLRLLRDEVENLRGTLESVRVRLTALEQGRSGTGP
STHTLAPLETQLNRHDDMLSVHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAV
AAKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQK
VTLMLMDQGPSRKHLGDAFKPDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDT
IFIKVTVDTSDLPDP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgattggttttggcgcggcgctattctcaaggagtttgaaagtaggacacctccaaatg
gtcatgtcagcagggaggagtgctgacgggagggaggtgcagattcccctccagcaggtg
gcgccctctgtggctgcctccctcgctgtggtctctcccatcaccccaccctctcaccgc
ccagccaatccctggccccccagcgaccctgctgcttctcacggtgtcgctgcaggtttc
ttgcctcttcatgaaggattcagagatcactttgtagaaactccagaagccaaatactgc
tgcgaggtgtgcaggctggtcctatgtcagcctcgccagaccgagtgtggacaccgcttc
tgtcagagctgcatcaaccacatcttcagtcagtcaaacccggtgtgtccagctgacatg
gagcagctgtttaaagacaagatcttcagagacgtttgctgccagcgggaaatcatggct
ctgaaggtttactgtcgcagtgaagccaatggctgtcaggaactgatgagtctgcaccag
atacctgaccacctaaatgtgtgtccattctttgaggttccctgtccattgggtaaatgc
aaagagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacaga
gagaccacctgcgagttctgcatcaccaagatgcctctgactgacctgcagaaacacaaa
gagacggtgtgtccagcattcccagtgtcctgtccaaaccactgctcctcttcctccctg
ccccggagtgagctgtccagtcaccaacacgactgtcctaaagctcaagtgatttgccag
tttcaccgttacggctgcaccttcaagggtctgaaccaggaaatgaggcaacatgagtcg
acctgtgcagctgagcacctgaggatgatggccaataggaactcctcattagagaacaag
gtggaggaggtcaaaggtgagctgttggagcgctataaggttcttccggctctcagcagt
cgtctgtcagacctggagaaccagaacgacgagctgagagacaagaaccgacaaatggag
cagaagttctccaccatgcagaaactcatgagttctcactcagagaagctgctagaggtg
gagctggagcttcgttctctgcgtctcctcagagacgaggtcgagaacctgagaggaact
ctggagagcgttcgggtgaggctgactgctctggaacaaggacgcagcggaaccggaccc
tctacacacactctggcacccctggagactcagcttaatcgacacgacgacatgctaagt
gtccacgagatccgattggctgacatggacctgcgtttccaggtgttggagacggcgagc
tacaacgggactctgatctggaagattcgcgactacaagagacggaaacaggaagctgtg
gcggcaaagacactgtcgctgtattcacagccattttatacaggatactttggatataag
atgtgtgcccgagtctacctgaatggagacggcatgggcaaagggacacacctttcgctg
ttctttgtggtaatgaggggcgagtacgacgccctgctgccctggcccttcaaacagaaa
gtgactctgatgctgatggaccagggtccgtccaggaaacacctgggcgacgccttcaaa
ccggatccaaacagcagcagcttccgacgccctgctgcagagatgaacatcgcctccggg
tgtcctctgtttgtgtctcagagtgtcctggagacaggcagctacattaaagacgatacc
atcttcatcaaggttaccgtggatacctctgacctacctgacccttga
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