Hippoglossus hippoglossus (Atlantic halibut): 117756445
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Entry
117756445 CDS
T07778
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117756445
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117756445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
117756445
NCBI-ProteinID:
XP_034432858
LinkDB
All DBs
Position
22:complement(9041974..9061016)
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AA seq
1795 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETENLDRQGMFMGGGQDLDTISVASVTAVTTNVSNKRSK
PDIKMEPSSGRPVDYQVSVTVIEARQLIGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNE
YFVFDFHVPPDVMFDKILKVSVIHSKNLLRSGTLVGMFKLDVGTIYTQPEHQFNHKWALL
SDPDDITAGCKGYVKCDVAVVAKGDTIKTPHKAKESDEDDIEGNLLLPEGVPAERQWARY
YLKIYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWN
EQIVFTEMFPPLCKRIKIQLRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWVNM
YGSTRTYSLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPEVASSTDAQVEGVPNI
SETATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEMDGIVQTKTKGKRSGG
DGDEEETELIHNSSDEEVDDDGDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWW
QDQRRRLYNANIIDNIAYKLEEGLNDVQEVIKTEKSYPERRLRGVLEELSHGCSQFLALA
NKDQNQSGKTKLDRERLKLCMSEVESIGQQAKAMRSQVKKSTVRDKIKLAQNFLTKLRFL
ADEPQHSVPDVFIWMISNGKRIAYARVPSKDILYSTIEEERGKECGKVKTIFLRIPGKKG
FGPAGWTVQSKIEIYLWLGLNRQRKDYLSGLPNGFEENKLSKGPGMPCSPPISLTYMMKQ
IFQLRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLPETLCPTWDQLLVFENVEL
FGEANELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQI
YRGNCTAGEMLAAFELLQLGPNGKADLPPIEGPTDIDRGPLLPVPLGIRPVLSKYRIEVL
FWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELL
HPPLNIRVVDCRAFGRYTLVGSNAVTSLRKFIYRATDKQANNWSSNTTEEIIVVGMESEP
AFKKMDTVVKLDSCSDAVVKVEDDDKDGKGKKKKRKKGEEAEEEELDESMLDWWSKYFAS
IETLMEALKAQEAALSDSEDKDDVDITDAGDIKPEDSPVKGTKRGKGKKKKMTFDPFEKK
KPKLDELKVYPKELESEFDNFEDWLHSFNLFRGKGGDEDDQNVTDEDRIVGKFKGSLCMY
KVSDDLSRDVNFDPNMGMFQNIPHNDPINVLVRIYVIRATDLHPADINGKADPYIAIKLG
KTEIKDKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLEN
RFYSKHRATCGITSNYAIHGYNVWRDPLKPTHILAKLCKEGKLDGPHYGPGGRVKVDNRV
FMAQTEIEDENGLKKQTDEHLALTVLKHWEDMPRAGCKLTPEHVETRPLLHPDKPGIEQG
RIEMWVDMFPKDMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFV
RGWLKGQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEY
KIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTPKQCTIEMVTNEGEMPCVSIFK
QKRIKGWWPFVARNEDDEFELTGKVEAELHLLTGEEAEKSPVGEGRNEPEPLEKPNRPDI
ALLWFLIPFKAAKNLVCNQYRWLTIKIVTALLLLAILGLFLYNMPGYMVKKMLGA
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgtggacacaaggaggacagaaatggagatgagccagctatc
ctggagacagaaaatctggatcggcagggaatgttcatgggaggaggacaggaccttgac
actatctccgtggcctcagtcacagccgttaccaccaatgtatcgaataagagatccaaa
ccagacataaagatggagcccagctctggaagaccagtagattaccaagtgagtgtgaca
gtgattgaggccagacagctgattggactcaacatggatcccatggtctgtgtggagatt
ggagaagataaaaagtacacctccatgaaggaatcaaccaactgcccgtactacaatgaa
tactttgtcttcgacttccacgtccctccagatgttatgtttgacaaaatcctgaaggtt
tctgtcatccactctaaaaatcttctgcgtagtggaacgctggttgggatgtttaaactg
gatgttggcacaatctacacacagccagaacatcagtttaaccacaaatgggctctgttg
tctgaccctgacgacatcacagcgggttgtaaaggctacgtgaagtgtgacgtcgcagtt
gtggccaaaggagacacgataaagactccgcacaaggccaaagagtctgatgaggatgac
atagagggaaatctcttattacctgagggggtacccgcagagcgacagtgggctcgctat
tacctgaagatctacagagccgagggactcccaagaatgaacaccagcatcatggccaat
gttaagaaggccttcatcggagaaaataaggacctggtcgatccttatgttcaagtactg
tttgctgggcagaaggggaaaacatcagttcagaagagctgctacgagcccatctggaac
gagcaaatagtgttcactgagatgtttccaccgctgtgcaagcgcataaagatccagctc
cgcgactctgataaagtgaatgatgttgctataggaacacacttcctggacttgcggaag
atttccaatgacggggacaaaggcttccttcccacactggggcctgcctgggtcaacatg
tacggctccactcggacctacagcctgatggacgaataccaggagttgaacgaaggactc
ggagagggggtgtccttcagagcccgtctgctcatcagcctgggtgtggagatcctggac
ccctcctcccctgaggtggccagctccacagatgcgcaggtggagggagtgcccaacatc
tcagagaccgcaactgggaaggtcgaggaatttttcctcttcggatcgttcctcgaggca
acaatgatcgatagaaagattggagataagcccatcaactttgaggtcaccataggttac
tacggcaacgagatggatgggattgtccagacaaaaaccaaggggaagagaagtggaggc
gacggagatgaagaagaaactgaactgattcacaactccagcgacgaggaggtggacgat
gacggagacctgacatcagtggcaactacaccgcccatgaagcctgtcatcactgatcga
aactacttccacttgccgtactttgagaggaagccgtgtatctacatcaagagttggtgg
caggatcagagaaggaggctgtacaatgccaacatcatagacaacattgcatataaattg
gaggagggactaaacgatgtgcaggaagtcattaagacagaaaagtcctatcctgagcgc
agactgagaggtgtcctggaggaactcagccacggatgcagtcagtttcttgcgctggca
aacaaggaccagaaccagtccggtaaaaccaaacttgacagggagagactgaagctgtgc
atgtcagaagtggagtccattggccagcaagcgaaggccatgaggtcccaggtgaagaaa
agcacagtgagagataagatcaagctggctcagaacttcctcacaaagctgcgcttcctg
gctgatgaacctcagcacagcgttcctgatgttttcatatggatgataagtaacgggaag
cgcattgcttatgcacgcgtgccctccaaggacatcctttactcaactatagaggaggaa
agggggaaggagtgcggcaaagtcaagacaatctttctcaggatccctggaaagaaaggc
tttgggcctgctggctggacagtgcagtccaagatagagatttatctgtggctgggtcta
aacaggcagcgcaaagactacctgagtggcctccccaatggatttgaggagaacaagttg
tccaaaggacccggcatgccgtgctcacctcccattagcctcacctacatgatgaagcaa
atcttccagctgagggtccacatgtaccaagctcgcagcctgtttgctgctgacagcaca
ggtctgtctgatccctttgcgagagtcttcttctccacgcaaagtcaggtcaccgaggtg
ttgcctgaaactctctgccccacgtgggaccagctgctggtctttgagaacgtggagttg
ttcggagaagccaatgagctgagagacgacccccccatcatcgtcattgaaatctatgat
caagacacagtgggcaaagcggacttcatgggcagaacctttgccaagcccgtggtcaag
atggccgacgagcactatggccccccgcgcttccctccgcagctggagtactaccagatc
taccgtgggaactgcaccgctggagaaatgctggcagcttttgaactcctgcagcttgga
cccaatgggaaagccgacctgcctccgatagaaggccctacagatatagaccgtggtccg
ctgctgcctgtaccactgggaatcagaccagtgctcagcaagtacaggattgaggttttg
ttctggggcttgagagacctgaaacgggtgaatctggcccaggtggatcggcctcgcgta
gacattgaatgcgccgggaagggggttcagtcggccctcatccccaactacaagaaaaat
cccaacttcagcaccctggtcaagtggtttgaagtggatttgcctgagaatgagctgctc
cacccgccactgaacatccgagtggtggactgcagggcctttggccgctacacgctggtc
ggctccaacgccgtcaccagcctgaggaagttcatctacagggcgacggacaaacaggcc
aacaactggtcctcaaacacaacagaggaaattattgttgtcggcatggaatctgagccg
gcttttaagaagatggacactgtggtcaaactcgactcttgctctgatgctgtggtcaaa
gttgaggacgacgataaggatggaaaggggaagaagaagaagaggaagaagggagaggag
gccgaagaggaggagcttgacgagagcatgttggactggtggtccaaatattttgcctcc
attgagactttgatggaggctctcaaggctcaggaagcagctctgtcagattcagaggac
aaagacgacgtggacattacagatgctggagatatcaaacccgaggactctcctgtgaaa
ggcactaagaggggaaaaggaaagaagaagaagatgaccttcgacccgttcgagaagaaa
aagccaaagttggacgagctgaaggtttatccaaaggagctggaaagtgaatttgacaac
ttcgaggactggctccacagtttcaacctgttcaggggaaagggcggcgatgaagatgac
cagaacgtgacagacgaggacagaattgttgggaaattcaaaggctcactgtgcatgtac
aaagtgtcggacgatctgtccagagacgtgaacttcgaccccaacatgggaatgtttcaa
aacattcctcacaacgaccccattaacgtcctcgtccgcatctatgtcatcagggcaact
gatctgcacccggctgacattaatgggaaagctgacccgtacatcgcgatcaaactggga
aagacagaaatcaaagacaaggagaactacatctccaaacagctgaaccctttgtttggc
aaatcctttgacgtggaggccacattcccgatggattccacactcacggtgtcgatttac
gactgggacctggttggaaccgacgatctgatcggggaaaccaaactggacctggagaac
cgtttctacagcaaacacagagccacgtgtgggatcacttctaactacgccattcatggt
tacaatgtttggagggacccattgaaacccacccacatcctggctaagctgtgcaaggag
gggaaactggacgggcctcactatggccccggaggaagagtgaaggtggacaaccgtgtc
ttcatggcccagactgagatcgaggatgaaaacggtttgaagaagcagacggatgaacac
ctggctctgaccgtgttgaagcactgggaggatatgccccgggccggatgcaaactcact
cctgagcacgtggaaacaagacccctgctccatcctgacaaaccgggaatcgaacaggga
cggattgagatgtgggtggacatgtttcctaaagacatgactgctccaggcccagcactt
gacatttcaccaaggaaaccgaagaagtttgaactgagggtgatcatctggaacacagat
gaagtcgttctagaggacgacgacatctttactggcgagaaatccagtgacatatttgtg
cgaggttggctgaaagggcagcaggaggacaagcaggacactgacgtccactaccactcc
atcaccggggagggcaatttcaactggcgcttcgtctacccctttgactacctcatggct
gaagagaagatcgtcatctcaaagaaagagtccatgtttgcctgggacgagaccgagtac
aagattccagctcgtcttaacttgcaagtgtgggacgccgaccatttctctgcagatgac
ttcttaggtgctattgagttggacctgaaccgtttcccacgcggtgcaaagactcccaag
cagtgcactattgagatggtgacaaacgagggggagatgccctgtgtctccatcttcaaa
cagaagaggatcaagggctggtggccgtttgtggccagaaatgaagatgacgagtttgag
ctgacgggaaaagtggaagcagagcttcaccttctgaccggagaggaagcagaaaaaagc
ccagtgggtgaaggacgcaacgaaccggagccactggagaaacccaaccgtccagacatc
gccctcctctggttcctcatccctttcaaagccgctaagaacctggtgtgtaaccagtac
aggtggctgaccatcaagatcgtcactgctctgctgctgctcgccatcttgggtctgttc
ctgtacaacatgcctggttacatggtgaagaagatgttgggagcctga
DBGET
integrated database retrieval system
