Hippoglossus hippoglossus (Atlantic halibut): 117757218
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Entry
117757218 CDS
T07778
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04260
Cardiac muscle contraction
hhip04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117757218 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117757218 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
117757218 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117757218 (cacna2d1a)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117757218 (cacna2d1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
117757218
NCBI-ProteinID:
XP_034434006
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Position
23:12595306..12678705
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AA seq
1078 aa
AA seq
DB search
MDYPVCLLLLLATVSSVSTGQFPTAHMVKEWVDQMQNDLIMLTDTSSGLQDLIQIFKTHK
AHFSVESNNPGELVSTAAGNIEKLLANRSQALKRLASEAEKFQMEHQWQGDSEIDKLIYY
NAKDDLNQTEKKNRYVPDDFHVDPDFKRLVSYNTTAVHIPTDIYEGSTIILNELNWTEAL
EDVFRKNKEEDPSLLWQVFGSATGLARYFPASPWMDLSNSASKIDLYDVRRRPWYIQGAA
SPKDMLILVDASGSVSGLTLKLIRTSVNKMLETLSDDDYVNVVSFNEKASHAACFQNLVQ
ANVRNKMMLKEAVQNIIAKGITNYKGGFELAFEQLAQLNVSRANCNKIIMLFTDGGEERA
EEIFKKYNPKQAVRIFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRINTQEYLDV
LGRPMVKADRRAKQVQWTNVYLDALELGLVITGTLPVFNKTNTGSKKSQNQLILGVMAID
VSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTAKFHEPVTLDFLDAEIENEM
KVEMRKKMIDAQKGDYTMATLVKSQDERYIDQNHRTYSYAPVKGTDYSLALVLPEYSMHY
IRATIGDTITQAKWKNVSESLLADKFDEYGYTFIAPRMYCKDLKPPDKNTNNTEFLMEFN
NYIDTKTPNNPMCNVELVNRLLLDAGITSDLIKLWKQNELPLGVSARFVATDGGITRVYP
KSAGLYWTEEAETYESSFYKRTLDNDLYIFTPTPYADKDNTSDDSVLVSRAVEITIDGIP
LKPAVAGVKLDISAWMARFINTTQRTNCNDEICGCQRNDVYVDCVILDDGGFLVMSNRDE
YIDQIGRFFGVIDPVLMRSLNDSLFTYKQTYDYQSLCDPKKESKAAAGLRSVYVPTIADI
LSLGWWATAAAWSILQQILVSVTFPNFLDAAELDDDVSDAMLKEVCITKQTQFYFLNNNV
SFRGTVDCENCSRLYHAEKLPKTNLVFIIADAKLTCSSCDATLMKQDEEPSEGPDPCELA
QSPRYRKGPAVCFDNNEHEADPDCGGASSLSPPLWLMASLQLVLLWVLTGSRNHAVPS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggattacccggtctgtctacttttactcttggccaccgtgtcgtcggtgtccacagga
caattccccacagcgcacatggtaaaggaatgggtcgaccagatgcaaaatgatttgatc
atgttaacagacacatccagtggcctgcaggacctaatacagatattcaaaacacacaaa
gctcacttcagcgtggaatcgaacaatccaggggaactggtgtcgacggccgctgggaac
attgagaaactgctggctaaccgctcccaagccctaaagcggctggcaagcgaagcggag
aagtttcagatggagcaccagtggcagggcgacagcgagatcgacaaacttatttactac
aacgccaaagatgacctgaatcagacggagaagaagaaccgctacgttccagatgatttc
cacgtcgaccccgacttcaagcgcctcgtctcttacaacaccaccgctgtccacatccct
acggatatatacgagggctccaccatcatattgaacgagctgaactggacagaagccctg
gaggatgttttccggaaaaacaaagaggaggatccctcgctcctctggcaggtgtttggt
tctgccaccggattggcccgctacttcccagcatctccttggatggacctgagcaactcg
gccagtaaaatcgacctgtacgatgtgcgcaggcgaccgtggtacattcagggggcggcg
tcacccaaggacatgctgatcttggtggatgcgagcggcagcgtttcaggtctcaccctc
aaactcatccgaacgtccgtgaacaagatgctggagaccctgtctgacgacgactacgtg
aacgtggtctctttcaacgaaaaggcctcgcatgcggcgtgcttccagaacctggtgcag
gccaacgtccgcaacaagatgatgctgaaggaagccgtgcagaacatcatcgccaagggt
atcaccaactacaagggcggcttcgagctggccttcgagcagctggcgcagctgaacgtg
tcgagggcgaactgcaacaagatcatcatgctcttcactgacggaggagaggaaagggcg
gaggagatatttaagaaatacaatccaaagcaagcggttcgaatcttcacgttttcagtc
ggtcaacacaactatgacaaaggaccaatacagtggatggcctgtgctaataaaggttat
tactacgagattccctctataggagccattaggatcaacacacaggagtacctggatgtt
ctgggcagacccatggtgaaggctgaccgaagggccaagcaggttcagtggaccaacgtg
tacctggacgcgctggagctcggcctggtgatcactggaactctgcctgtcttcaacaag
accaacacaggctcgaagaaatcacagaaccagctcatcctgggggttatggctattgat
gtctcgctggaggacatcaagagactcacgcctcggttcacgtttggaccgaatggttac
tactttgccatcgaccccaacggatacgtgctgctccaccctaatctccagccgctgact
gccaagttccatgaacctgtaacgctggacttcctggacgcagagatagagaacgagatg
aaagtggagatgcggaaaaaaatgattgacgcacaaaaaggggattacacgatggctaca
ctggtgaaatcccaagacgagcgttacatcgaccagaaccacaggacttacagctacgca
ccagtgaagggaacagattacagcctggccctggtcctccccgagtacagtatgcattac
atccgggccacgatcggtgacacaatcacccaggctaaatggaaaaatgtttctgagagc
ctgctcgccgacaagtttgatgaatatggctacacgttcatcgctccgaggatgtactgt
aaggatttaaaaccacccgacaagaacacaaacaacacggagttcctgatggagttcaac
aactacatcgacacaaagactccaaacaaccccatgtgtaatgtggagctggtgaacaga
ctgctcttggatgcgggcataacctcagatctgattaagctttggaaacaaaatgagctg
ccgctcggtgtctcggccagatttgttgccactgatgggggaatcacgcgggtctacccc
aaaagtgccgggctgtactggacggaagaagcagagacgtacgagtcaagtttctacaag
cgaactttggacaatgatctgtacatcttcactccaacaccctacgcagataaagacaac
acaagtgacgactcagtgctggtgagcagagcggtggagatcactattgatggtatccca
cttaaaccagctgtggccggcgtgaagttggacatcagcgcctggatggcgaggttcatc
aacaccacgcagaggacgaattgcaacgatgagatctgtggctgtcagagaaatgacgtg
tacgtagactgcgtcattctggacgacgggggcttcctggtgatgtccaatcgagatgaa
tacattgatcagatcggacgtttctttggcgtgatcgaccccgtcctcatgaggagcctg
aacgactccctgttcacctacaagcagacctacgactaccagtcgctctgtgaccccaag
aaggagagcaaggcggctgcaggcctgcgatcagtctacgtgcccacaatcgcagatatt
ttgagtttggggtggtgggcaacagctgcagcctggtcgatactgcagcagatattggtc
agcgtcacattccccaacttcctggatgcagctgaattggatgatgacgtgtcagatgcc
atgctgaaggaggtctgcatcaccaagcaaacccagttttactttttgaacaacaacgtg
tctttccgaggcacagtggactgtgagaactgctccaggctctatcacgctgaaaagctg
cccaagactaacctggtctttatcatcgctgatgcgaaactcacctgctcgtcctgtgac
gccaccctgatgaaacaggatgaggagccgtctgaaggtcccgatccctgtgagctggct
cagagtccccggtacaggaaagggcctgcagtctgttttgataacaacgaacacgaggcg
gatccagactgtggcggggcatccagcctgagtcccccgctttggctgatggcgtctctt
cagctggtactgctctgggttctgactggatccagaaaccatgctgtcccgtcatga
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