Hippoglossus hippoglossus (Atlantic halibut): 117757300
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Entry
117757300 CDS
T07778
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117757300 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117757300 (irf5)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117757300 (irf5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117757300
NCBI-ProteinID:
XP_034434196
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Position
23:complement(18373335..18382038)
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AA seq
476 aa
AA seq
DB search
MSVQPRRIRLKPWLLAQVNGGRFPGLQWINSEQRLFQIPWKHATRHTPTSDEENTVFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVRPYKIYEVCEQPAST
GDVTGELVTGGFDDDDDEEMPNLMDLTINPRISDPSPFNQFSLSSNEMFGPHHVIPVPVL
PLNSDLQAPGQNFVSGLSTRLQDLNSLPPPAASVTPGPDLMEASSIGGIQNQQHCKYDLL
SSVPLTDLDLKFQYRGRIMGSLTVSNPQGCRLYSGHLEPSPEQVELFGPVTLQQVLFPGT
SEIQNQKQRFYTEALLDVMDRGLILEIWEQDIYAIRLCQCKVFWSGPGTTEQSPPNPLER
EKKIKVFSLNEFLQGLILFQKGEATNPPPFEIYFCFGEDWPDKKPKEKKLIIVQVVPVVA
RILTEMFSGELSWSTDSIRLQISNPDVKDQTVEQFKELQKLLQSQHIQGPWTPNVP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagcctcggaggatccgtctgaagccgtggcttctggcgcaggtgaacggt
ggcaggtttcctggtctccagtggatcaactcggaacaacgcctcttccagatcccctgg
aaacacgctacacgccacacgccaacgtctgatgaagaaaacactgtcttcaaggcatgg
gctcttgagacaggtaaatatcaggaaggtgtagatgaaccggaccccgccaagtggaag
gcgaaccttcgctgcgctctgaacaagagtcgagagtttcagctgaaatacgacggaacc
aaagagacgccggttcgtccgtacaagatctacgaggtctgcgagcagccagcgagcacg
ggtgatgtcacaggtgaactggtcacaggtggctttgatgatgatgatgatgaagagatg
ccaaacctaatggacctcaccatcaatcccaggatcagtgacccctcccccttcaatcag
ttcagtttatcttccaatgagatgtttggacctcatcatgtgatcccggtgcccgtccta
cctttgaactctgacctccaggccccgggtcagaactttgtctctggactctcgaccaga
ctccaggacttgaactctttgccgccccctgctgcctctgtaacccctggaccggacctg
atggaggccagcagcataggagggatccagaaccagcaacactgcaagtacgacctgcta
agcagtgtcccactaacagatctggacctgaagttccagtaccggggtcggatcatgggc
tctctgacagtgagcaaccctcagggctgccggctatactctggccatctagagccaagc
ccggaacaggttgagctgtttggacccgtcaccctgcagcaggtcctgttcccagggaca
tccgagatccagaaccagaagcagcggttctacaccgaggccctgctagatgtgatggac
agaggtctgatcctggagatctgggaacaggacatttacgccatccgcctctgtcagtgt
aaggtgttctggtctggaccgggcacaaccgaacagagtccacccaaccccctggagcgc
gagaaaaagatcaaagttttcagtctgaatgaattccttcaaggtctgatcctgttccag
aaaggtgaagctacaaaccctccaccctttgagatctacttctgctttggggaggactgg
ccggacaagaaacccaaagagaaaaaactcatcatcgttcaggtggttcctgttgtggct
cgcatcctgacggagatgttctcaggagaactcagctggtcgaccgacagcatccgacta
cagatctcaaaccctgacgtcaaggaccagacggtggagcagtttaaagaactgcagaag
ctcctgcagagccaacacatccagggcccctggacccccaacgtgccctga
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