Hippoglossus hippoglossus (Atlantic halibut): 117757608
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Entry
117757608 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-C-like
KO
K27393
filamin-C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117757608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117757608
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117757608
Intermediate filaments
Intermediate filament-binding proteins
117757608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
117757608
NCBI-ProteinID:
XP_034434780
LinkDB
All DBs
Position
23:18175890..18208129
Genome browser
AA seq
2707 aa
AA seq
DB search
MMSNSGFLEPQLPPQLYQGPADTGEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLK
VMNKRISDLQKDLGDGLKLIGLLEVLSQKKMYRKYHNRPNFRQMSWRTCPWRWSFLEREH
IRLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQN
KVPQLPITNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGV
PQVIAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRAKTLHPKRAKAFGPGIEPRGNM
VLKPAEFLVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRTYSVVYLPKVEGLHKVK
VLFAGQDIDRSPFIVNVSKAMGDPSRVQARGPGLQTMGNVANKPTYFDIYTAGAGAGDVG
VIIVDSNGRRDTVEIVLENKGDSIFRCTYVPVLEGAHTVCVTFAGQQIPTSPFTVHICEA
CNPNACRASGRGLQPKGLRVKEVADFKVYTKGGGSGELEVTVKGPNGLEEPVKVLEVENC
VFECNYYPIMTGKYIVTVTWGGHSIPRSPFEVQVGEEAGPQKVRAWGPGLETGLVGKSAD
FVVEAIGTEVGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGDFAVHVICDDEDIKD
SPFMAHILSAANDIFPEKVKCYGPGLEPLGCIVNKPADFTIDAHGAGRGELKLYAQDAEG
FPIDIQITENEDSTFLCVYIPTKPIKHTIIVTWGEVNVPNSPFRVTIGEGSHPENVKVYG
PGVEKTGLKANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTV
KYMPPXSGQYTIMVLFADQEIPISPFRIKVDPSHDAAKVRAEGPGLNKTGVEVGKPTHFT
IYTKGAGKAKPEVHFTAATKGEAVRDFEIIDNHDYSYTVRYTAVPAVNHVHCLSQGNVSV
TVCHGGDPIPKSPFNISVAPPMDLNKVKVQGLNNKVDVGKDQEFTISTRGAGGQGKLEVK
ITSPSRRPIPCKLESGTANELHTVKYIPPEEGPFRLDICYDGHPVPGSPFTVESVMPPDP
TKVRAYGLGLQGGIVGKPAPFAIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYL
PTEPGEYAINILFADQHIPGSPFKAVVHTAFDPSKVTASGPGLERGKVNEDGSFTVDCSK
AGEAELTIEIISDSGAKAEVHIQNNSDGTYSITYIPQFQGTYAITIKYGGHAVPKFPVRL
QVEPAVDTSGVKVHGPGVEPRGVLREVTTHFIVDARSLYKSGSQIKTCISNPLGANTDAY
ITDKGDGTYRVEYTPYEDGLHLIDVLFDDVSLPKSPFRVTVTEGCDPSRVRAYGPGLEEG
LVNKPNRFTVETRGAGTGGLGLAIEGPSEAKMSCKDNKDGSCSVEYIPFTPGEYDVNITF
GGLPIQGSPFRVPVRELVDPSKVRCSGPGLGSGVRAHVSQTFIVDCSKAGVAPLEVQLYG
PTGVTEPISISDNSDGTHTVNYTPANDGPYTVCVKYADQEVPRSPFKIKTLPAHDASKVR
ASGPGLNASGVPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNRDGTYTVSYV
PDMTGRYTITIKYGGDEIPYSPYRIHALPTGDASKCLVTVSIGGHGLGSGIGPTIQIGEE
TVITVDAKAAGKGKVTCKVSTPDGAELDVDVVENADGTFDIYYTAPEPGKYVITIRFGGE
HIPNSPFHVVATDDPISPVDGMEPVLRPFSLVIPFTVQKGEITGEVRMPSGRTACPHITD
NKDGTVTVKYSPTERGLHEMEIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGTVNR
PSTFTIVTKDAGEGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTAPGDYNIIVKFDDKH
IPGSPFTAKITGDDSMRTSQLNVGTATDVSLKITETDLTSLTATIRAPSGSEEPCLLKRL
PNRHIGISFTPKEVGEHVVSVKKNGKHVTNSPFKIMVGQSEIGDASKVKVLGQGLLEGHT
FEVSEFIVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINIKFAD
QHVPGSPFTVKMFGEGRMKESITRKRQAPSIATVGSTCDLNLKIPGNWFQMVSNQEHLTR
TFTRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGDPFREVFGDFLGRESLSGFSGN
RPPLQDGEAGNQEMTAQVTSPGGKTEEAEIIRGEDSTYSVRFIPQEMGPHTVSVKYRGQH
VPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGIPAEFSIWTREAGAGGLSIAVEGPSK
AEITFEDRKDGSCGVAYVVQEPGDYEVSVKFNDEHIPDSPFIVPVATLSDDARRLTITSL
QEMGLKTGQEASFSVQLNGARGLIDAKIHSPSGAVEECYITELDSDQHAIRFVPRENGVH
SIDVRFSGSHVPGSPFKIRVGEPGQVGDPGMVSAFGPGLEGGITGVASEFIVNTCNAGSG
ALSVTVDGPSKVKMDCQECAEGYKVSYTPMAPGNYLISIKYGGGHVVGSPFKAKVSGPRL
SGGHSLHEMSSVLVETVTKSSMMGGAFASIPKFSSDATKVVSRGAGLSKAFVGQKNAFTV
DCTKAGTNMLMVGVHGPKTPCEEVYVKHMGNRTYNVTYTVKEQGSYILIVKWGDENVPGS
PFHVTVP
NT seq
8124 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaacagcggcttcttggagccgcagctgccgccgcagttgtaccaaggcccc
gcagacaccggggaggaggaggaggagatgccggccacggagaaggacctggcggaggac
gctccgtggaagaagatccagcagaacacgttcacgcgctggtgtaacgagcacctgaag
gtgatgaacaagcggatcagcgacctgcagaaggacctgggcgacgggctgaagctcatc
gggctgctggaggtgctgagccagaagaagatgtaccggaagtaccacaacagacccaac
ttcaggcagatgagctggagaacgtgtccgtggcgctggagtttcctggagagagagcac
atcaggctcgtgtccatcgactctaaagctatcgtggacgggaacctgaagttgatcctg
ggtctgatctggaccctgatcctccactactccatctccatgcccatgtgggaggacgag
gacgacgaggacgcgaagaaactgacgccaaagcagcgtctgctgggctggatccagaac
aaggtgcctcagctccccatcaccaacttccaccgagactggagggacgggaaggcgctc
ggagcactggtggacaactgtgcccccggtttgtgtccggactgggaaacatgggatccc
agtcagccggtggagaacgccagagaggccatgcagcaggcggacgactggctcggagtt
ccacaggtgatcgctccagaggagattgtcgacccaaacgtggacgagcactctgtgatg
acctacctgtctcagttccctaaagccaaactaaagcccggcgcccccttgagggcaaag
actctgcacccgaaaagagccaaagctttcggacctggtatcgaacctcgagggaacatg
gttctgaaaccagcggagttcctggtggagacggtggaggccggactgggtgaggttctg
gtttacgtggaggatccagagggacatacggaggaggctcgagtcatccccaacaacgac
aagaacagaacctactctgtggtctacctgcccaaagtggaggggcttcataaggtgaag
gtgctgttcgctgggcaggacattgacagaagtcccttcatcgtgaacgtttccaaggcg
atgggcgacccgagcagagtccaggcccgtgggccggggctgcagacgatggggaacgtg
gccaacaagccgacgtactttgacatttacacagcaggggcgggagccggagacgtgggc
gtcatcatcgtggactctaacggtcgcagggacacagtggagattgtcctggaaaacaaa
ggggacagtattttccgctgcacctatgtccccgtcctggagggggcgcacaccgtctgc
gtgacctttgccgggcagcagattcccacaagccctttcactgtccacatctgtgaggcc
tgcaacccgaacgcctgccgagcctcaggccgcggcctgcagccaaaaggtctgagggtg
aaagaagtggcagattttaaagtttacactaaaggaggcggcagcggtgaactcgaagtc
accgtgaagggaccaaacggtcttgaggagccggtgaaggtcctggaggtggaaaactgt
gtgtttgagtgtaattattatcccatcatgacgggaaaatacatcgtcaccgtcacctgg
gggggacacagcatcccacgcagtccgtttgaagtgcaggtaggtgaggaggcggggcct
cagaaggtgagggcctggggcccggggctggagactggattggtcgggaagagtgcggac
tttgtggtggaggccatcgggacggaggtgggaacgctcggcttctccatcgagggcccc
tcgcaagccaagatcgagtgtgacgataaaggtgacggatcatgtgacgttcgttactgg
ccgactgaacccggcgacttcgccgtccacgtcatttgtgacgacgaggacatcaaggac
agtccgttcatggctcacatcctctctgctgccaacgacatcttcccagagaaggtgaaa
tgttacggtcctggtctggagcctctcggctgcatcgtcaacaaacctgctgacttcacc
atcgatgctcacggagccggacgaggagaactgaagctctacgctcaggacgccgagggt
ttccccatcgacatacagatcacagaaaatgaggacagcaccttcctctgcgtttatatt
cccactaaacccatcaaacacaccatcatcgtcacctggggcgaagtcaacgtccccaac
agcccgttcagggtgacgatcggtgaaggcagccatccggagaacgtgaaggtttacggt
ccaggcgtggagaagacgggactgaaggccaacgagccgacgtacttcaccgtggactgc
agcgaggccggccagggtgacgtcagcatcgggatcaaatgtgctccaggtgtggtcgga
cctgccgaggccgacatcgacttcgacatcatcaagaacgacaacgacacgttcacggtg
aagtacatgcccccgnngtccggacagtacaccatcatggtcctgttcgctgatcaggaa
atacccatcagccccttcagaataaaggtggatccctcccatgatgcagctaaagtccga
gcagaaggacctggactgaataaaacaggtgtggaggtggggaaaccaactcacttcacc
atctacactaaaggagcaggaaaagccaaacccgaggttcatttcactgcggccactaaa
ggtgaagccgtcagagacttcgagatcatcgacaaccacgactactcctacaccgtccgc
tacacggccgttccagcagtaaaccatgttcactgtttgtctcagggcaacgtgtccgtc
acagtttgtcacggaggagaccccatccctaaaagtccctttaacatcagtgtggcgccc
cctatggacctgaacaaggtcaaagttcaagggctgaacaacaaggtggatgttgggaaa
gatcaggagttcaccatcagtacacgaggagctggaggtcagggcaaactggaggtcaag
atcacctccccgtcacgtcgaccaatcccctgcaagcttgagtcgggcacagccaatgag
cttcacacagtgaaatacatcccccctgaggaggggccgttcagactggatatctgctat
gacggacaccccgtcccaggaagtccgttcactgtggagagcgtgatgccgcctgacccg
accaaggtgcgtgcctatggtctaggtcttcagggaggcattgtgggtaaacccgccccc
tttgccattgacacaaagggagcgggcaccggcggtttgggcctgacggtggaggggccg
tgcgaagcaaagatcgaatgtcaggacaacggtgacggctcctgttcggtctcctacctg
ccgactgagcccggtgagtacgccatcaatatcctgttcgctgaccagcacatccccggc
tcccccttcaaggccgtggtgcataccgccttcgatcccagcaaggtgacggcgagcggc
cccggcctagagcgaggcaaagtcaacgaggacggatcgttcacggtggactgctccaaa
gccggagaggcggagctcaccattgagattatctcagactctggagccaaagctgaagtt
cacatccagaacaacagcgacgggacgtactccatcacctacatcccacagttccagggc
acgtacgccatcaccatcaaatatggaggacacgccgtgcccaagttccccgtccgcctg
caggtggagccggctgtcgacaccagcggagtcaaggtccacggacctggagtcgaaccc
agaggcgtcctgagggaagtgaccacacatttcatcgtcgatgctcggtcgctctacaaa
agtggcagtcaaatcaaaacctgcatctccaacccgttaggcgccaacacagacgcctac
ataaccgacaagggcgacgggacgtacagggtggagtacacgccgtatgaggacggttta
catctgattgacgtcctgttcgacgacgtctctctgccgaagagtccgttcagagtgacg
gtgacggagggttgtgatcccagtcgagtgcgagcgtacggtccaggtctggaggaagga
ctggtcaacaaaccgaaccgtttcaccgtcgagaccaggggagcaggcaccgggggtctg
ggtttggccattgagggtccgtctgaggcgaagatgtcgtgtaaagacaacaaagatggc
agctgcagcgtggagtacatccccttcactcctggagagtacgacgtcaacatcacgttt
ggaggtctccctatccaaggaagtcctttcagggtcccggtgcgagagctggtggatccc
agtaaggtgagatgttcaggtcctggactgggaagtggagtcagagctcacgtctcccag
acgttcattgtcgactgcagcaaggccggcgtcgctccgctagaggttcagctctacggt
ccgacaggtgtgaccgaacccatcagcatcagcgacaacagtgacgggactcacacggtg
aactacactcctgccaacgatggcccgtacacggtgtgtgtgaagtacgccgaccaggag
gttcctcgcagtccgttcaagatcaagacgttaccggctcacgatgccagtaaagttcga
gccagcggtcccggtctgaacgcatcaggggtcccggccagtctgccggtggagttcacc
atcgatgcccgggacgctggagagggactgctcaccgtccagatcctggatccggaggga
aaacctaagaaggcaaacatccgagacaaccgggacgggacgtacacggtgtcgtacgtc
cccgacatgacgggacgctacaccatcaccatcaaatacggaggagacgagataccgtac
tcgccgtacagaatccacgccttgcccaccggggacgctagcaagtgtctggtcacagtg
tcgattggaggacacggtctgggatcagggatcggcccgaccatccagattggcgaggag
accgtcatcaccgtggacgcaaaggctgctgggaaaggtaaagtcacctgtaaggtgtcg
actcctgacggagcggagctggacgtggacgtggtggagaacgcagacgggacgtttgat
atctactacacggccccggagccggggaagtacgtcatcaccatccggttcggaggggaa
cacattcccaacagccccttccacgtggtggcgaccgatgatcccatcagccccgtggac
gggatggagccggtgctccgccccttcagtctcgtcattcccttcacggtgcagaaagga
gaaatcacaggtgaggtgcgaatgccgtctggtcgaaccgcctgtcctcacatcaccgac
aacaaggacggaaccgtcactgtgaaatactcgccaactgaacgaggtctgcacgagatg
gaaattaaatacgacggaaaccacatccccggaagtcctcttcagttctacgttgatgcc
atcaacagtggtcatgtgacagcgtacggccccggtctgagccacggcaccgtgaaccga
ccgtctacgttcacgatcgtcactaaagacgccggcgaagggggtctctctctggcggtg
gagggtccgtctaaagctgagatcagctgtaaagacaacaaagacgggacgtgcaccgtg
tcctacctgccgaccgcacctggcgactacaacatcatcgtcaagtttgacgacaaacac
atccccggcagtcccttcaccgccaagatcaccggcgacgactctatgaggacttctcag
ctcaacgttggcacggcaacagacgtttccttgaagatcacggagacggacctgaccagt
ctgacggcgaccatcagagcgccgtctggaagcgaggagccgtgtttgctgaagaggctt
ccgaacagacacatcgggatctcgttcacgccaaaggaagtgggcgaacatgtggtcagc
gtgaagaagaacgggaaacatgtgaccaacagtccctttaagatcatggtgggtcagtct
gagatcggagacgccagtaaggtgaaggtcttgggtcaggggctgctggagggacacacc
ttcgaggtgtccgagttcatcgtggacaccaggaacgcaggttacggaggtctgggtctg
tccatcgagggtcccagtaaagtggacattaactgtgaggacgtggaggacggaacctgt
aaagtcacctactgtcccaccgaacctggaaactacatcatcaacatcaagttcgctgat
caacacgttccaggaagtccgttcacagtgaagatgtttggcgaggggcggatgaaggag
agcatcaccaggaaacgtcaggcgccctccattgccaccgtcggcagcacctgtgacctc
aacctgaaaataccagggaactggtttcagatggtgtcgaaccaggagcatctgacgcgg
acgttcacccgcagcagtcacacgtacactcgcaccgagaggacggagatcagcaaaacc
cgaggaggcgagacgaagagggaggtccgcgtggaggagagcacgcaggtcggagatccc
ttcagggaagtgttcggagacttcctgggacgagagagtctgagcgggttcagcggcaac
agaccgccactgcaggacggtgaggcaggtaaccaggaaatgacggctcaggtgacgagt
cccggaggaaagacggaggaggcggagatcattagaggagaggacagcacctacagcgtc
cggttcatccctcaggagatgggccctcacaccgttagtgttaaataccggggccaacac
gttcccgggagccccttccagttcactgtggggcccctgggagagggaggggcccacaag
gtccgagcaggaggaaccggactggaccgaggagtggccgggatcccagctgagttcagt
atctggaccagagaagccggagctggaggtttgtccatcgctgttgaaggacccagtaaa
gctgagatcacgtttgaagacaggaaggacggatcctgtggcgtcgcctacgtggttcag
gaacctggtgattatgaggtttctgttaaattcaatgacgaacacatcccagattctccg
ttcatcgtccccgtcgccactttgtcggacgacgctcgccgcctcaccatcaccagcctg
caggaaatgggtctgaagacgggacaggaagcttcgttctctgtgcagctgaacggagcc
agaggtctgatcgatgctaagatccactcgccgtcaggagccgtggaggagtgttacatc
accgagctggacagtgatcaacacgccatcaggttcgtcccgagagaaaacggcgttcac
tccatcgatgttcgttttagcggcagccacgtccccggcagccctttcaagatccgagtg
ggagaaccaggacaggtcggagatcctggtatggtgtcagccttcggaccgggactggag
ggaggaatcacaggtgtggcgtcagagtttatcgtgaacacctgtaacgccggctcagga
gctctgtcggtgaccgtggacggaccgtccaaagtgaagatggactgtcaggaatgtgct
gagggctacaaggtctcatacacacccatggcccccgggaactacctgatctccatcaag
tatggaggtggtcacgtggtcggaagtcccttcaaggccaaagtctcaggacctcgtctg
tccggcggccacagtcttcatgagatgtcgtccgttctcgtggaaaccgtcaccaagtcg
tcaatgatgggcggggccttcgcctctatacccaaattctcctcagacgccactaaggtc
gtgtccagaggagccggcctatcgaaggccttcgtcggtcagaagaacgcgttcacggtc
gactgcactaaagcaggaaccaacatgctgatggtcggtgtccacggaccgaagacgccg
tgtgaggaggtgtacgtcaaacacatgggcaacaggacgtacaacgtcacatacacggtc
aaagaacagggcagctacatcctcatcgtcaagtggggggacgagaacgtccccgggagc
ccgttccacgtcaccgtcccctga
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