Hippoglossus hippoglossus (Atlantic halibut): 117762155
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Entry
117762155 CDS
T07778
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117762155 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117762155 (snrpb)
03041 Spliceosome [BR:
hhip03041
]
117762155 (snrpb)
03032 DNA replication proteins [BR:
hhip03032
]
117762155 (snrpb)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117762155 (snrpb)
Spliceosome [BR:
hhip03041
]
Complex A
U1 snRNP components
Sm proteins
117762155 (snrpb)
U2 snRNP components
117762155 (snrpb)
Complex B
U1 snRNP components
117762155 (snrpb)
U4/U6.U5 tri-snRNP components
117762155 (snrpb)
Complex C
U2 snRNP components
117762155 (snrpb)
DNA replication proteins [BR:
hhip03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117762155 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117762155
NCBI-ProteinID:
XP_034442548
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All DBs
Position
5:504951..509564
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AA seq
238 aa
AA seq
DB search
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGASIAGAPTQYPPGRGAPPPMGRGA
PPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPPRP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggaaagagcagtaagatgctgcagcacattgacttcaggatgagatgcatc
ctgcaggacggacgcatcttcatcggaacctttaaagccttcgacaagcacatgaacctg
attctgtgtgactgcgacgagttcaggaagatcaagccgaagaactcaaagcagcctgag
cgggaggagaagagggttctgggattggttctgctgaggggagagaacctggtttccatg
acggtggagggccctccccctaaagacactggtatagccagagtcccgttggcgggtgtg
gcgggggggccaggtgtgggccgggccgctggtcgtggggttcctgcaggagcgccgatg
cctcaggctccggccggactcgctgggcccgtcagaggagtgggcgggccttcccagcag
gtgatgacgccgcagggcagagggacggttgctgcggcagcagctggtgcgagcatcgcc
ggggcccccacacagtatccacctggacgaggagccccgccaccaatgggccggggagct
ccgcctccaggtatgatgggtccgccccctggcatgcgacctccgatgggtcctcccatg
gggatgcctccaggtcgaggagctccgatggggatgccgccccccggcatgaggccccca
ccccccggcatgagaggaccaccccctcctggaatgagaccgccgccccgtccctga
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