Hippoglossus hippoglossus (Atlantic halibut): 117762737
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Entry
117762737 CDS
T07778
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04260
Cardiac muscle contraction
hhip04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117762737
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117762737
04261 Adrenergic signaling in cardiomyocytes
117762737
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117762737
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117762737
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
DUF2201
Cache_3-Cache_2
VWA_CoxE
L544_NTransf
Motif
Other DBs
NCBI-GeneID:
117762737
NCBI-ProteinID:
XP_034443199
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Position
6:11473877..11535844
Genome browser
AA seq
1087 aa
AA seq
DB search
MYTCRVPAWVFLVLVWQGGCLASQFPTQLMIKEWVDQMQKELVTLADTATGGMSLTQIFL
RNQHLYSVEQNDAEELVARAARNIEQLLRKRSAALKKLAAAAEQFQVDHTWKDEFEDDEI
SYYNSKDNLDANETEGKKYRLRPDFKEDASFRRLTDHNHTAVHIPTDIYDGSTIVLNELN
WTEALEDVFRKNREDDPTLLWQVFGSATGLARYFPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKKTACF
DHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFEQLSVKNVSRANCNKIIMLFTDG
GEERAQAILEKYNADKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQIQWTNVYLDALELGLVITGTLPVFNRTMTVDERHGEHQNQL
ILGVMGIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDLL
DAELENDIKVEIRKMMIDGEIGERTIHTLVKTQDERYIDRGIRTYTWAPVNGTDYSLALA
LPKYSEHFIQAKLGEDMKEAMSSTWGQGAMETMQLDRFDEFGHTYIAPREYCKELKLSLN
NTQFLLDFNQFIERTPPEACNVSLVSRLILDAGLTAELVQLWNEQSVDGIVARFVATDGG
ITRVYPRSAAEEWSENHETYESSFYKRTLDNEIYIFTAPAFNTEGREPVSEPCILVSKAV
DLTIDKVTLKPAVVGVKLNISFWMNSFMNATLKLNCKDEICGCLKNDKHVDCVILDDGGF
LLMSNQDEYISLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSVCDPEKDSKAAAGPRS
VYVPTIADLLSVGWWASTAAWSILQQLIYGLIFPNLLEAVESAEEEISDAMFKESCITEQ
TQYFFDNDERSYSGVLDCGNCSRMYRGEKLPNTNLVFLITDAKATCLSCDPRPLRQAEQP
SEGPDPCELAQNPRYRKGPDACFDNNENDEPLCPISRGSALSSAPPVLFLLLSSGLVSVG
ASPLILP
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtatacctgcagggtgccagcctgggtgttcctggtcctggtgtggcagggcggctgt
ctggcatcgcagtttccgacacagctcatgattaaagaatgggtggatcagatgcagaag
gagctcgtgaccctggcagacacggccacaggcgggatgagcctcacacagatttttctg
agaaaccagcacctgtactctgtggagcaaaacgacgcagaggagctggtggccagagca
gccaggaacattgagcagctgctgcggaagaggtctgctgccttgaagaaattggccgcg
gctgctgagcaattccaggtggatcatacgtggaaagacgagttcgaggatgatgaaatc
tcctactacaactcaaaggacaatctggatgcaaatgagacggagggaaaaaaataccgg
cttcgaccagactttaaagaggacgcgtcatttaggcgtttgactgatcacaaccacacg
gctgtccacatccccactgacatctatgatggatccaccattgtgctgaatgagctgaac
tggacggaggccctggaggacgtgtttagaaagaacagagaggatgacccaacactcctc
tggcaggtgtttggtagcgctacaggcctggctcgctacttcccagcttctccgtggatg
gatgctcgtaaaacccccagtaaaattgacctgtatgatgtccgcaggaggccatggtac
atccaaggagccgcttcccccaaagatatgctaatcctcgtcgatgcgagcggtagtgtg
tctggcttgactctgaaactgatcaggacctcggtcagcgagatgctggagactctatct
gacgacgactacgtcaacgtagtttatttcaacaccagggtgaagaagacggcgtgtttc
gatcacctggttcaggccaacgtgaggaacaagaagctgctgaaggacgccgtgcagaac
atcacagctaaaggaataacaaactacaccaaaggcttcgagtttgcttttgagcagctg
tctgtgaaaaatgtgagcagagcaaactgcaacaagatcatcatgctgtttactgatgga
ggagaggagagagctcaggccatactggagaaatacaatgctgacaaaaaggtgaggatc
ttcaccttctcagtcggacaacacaactatgacaaaggacccattcagtggatggcttgt
tccaacaaaggttacttctatgagattccgtccatcggagccatcagaataaacacgcag
gagtacctggatgtcctggggcgacccatggttctggcagacaagcaggccaaacagatc
cagtggaccaatgtgtaccttgatgccctggaactgggtctggtcatcacgggaacactc
cctgtcttcaatagaaccatgaccgtagatgaaaggcatggcgagcaccagaaccaattg
attctcggtgtgatggggatcgacgtgtctctggatgacatcaagaaactcacgccacgc
ttcactattggtccaaatggatactactttgccattgaccccaatggatacgtcctgctg
caccccaacctccagccgaagaatcctaaattccaggaacctgtaactcttgaccttctg
gatgccgagcttgaaaatgacatcaaagtggagatcaggaaaatgatgatcgacggggag
ataggcgaacgcaccattcatactctggttaaaactcaggatgagagatacatagataga
ggaatccggacctacacatgggcaccagtcaatggaacagattacagcctggctctcgcc
ctgcctaaatacagtgaacacttcattcaagctaaactaggggaagacatgaaagaagct
atgtcttctacttgggggcaaggagctatggagacgatgcagctggataggtttgatgaa
tttggtcacacctacatcgctccgagggagtactgcaaagagctgaagttgtcactcaac
aacacccagtttctcctcgacttcaaccagttcatcgaaagaacccctccagaagcatgt
aacgtgtccctcgtgagtcggctgatcctggacgcaggtctgacggctgaactggttcaa
ctttggaatgagcagagtgtggatgggattgtcgccaggtttgtagccacagatggagga
atcacgcgggtctacccacgaagtgctgcggaagagtggagcgagaatcatgagacctac
gagtccagtttctacaaaaggaccctggacaatgaaatttatattttcacagctccagct
ttcaacacggagggaagagagcctgtttctgagccatgtattctcgtgagcaaagcagtg
gacctcaccatcgacaaagtcacactcaaaccagcagtggttggagtgaaactcaatatc
tccttctggatgaactctttcatgaatgctactctgaaactgaattgcaaggatgaaatc
tgtggctgtctgaagaatgacaagcatgtcgactgtgtgatcctggacgatggaggattt
cttctcatgtccaatcaggatgagtacatctctctgataggtcagttctttggcgaggtg
gacccggtgctgatgatcaacctggtcaacacgtccctttactcctttaacaagacctat
gactaccagtcggtctgcgacccagagaaggacagcaaggctgcagcaggaccccgctcc
gtctatgtgcctaccattgcagacctgctcagtgtcgggtggtgggcctccaccgctgcc
tggtcgatactccagcagctcatctatgggctgattttccccaaccttctggaagcagtg
gagtcagcagaggaagaaatatcagacgccatgtttaaggaaagctgtatcacggagcag
actcagtacttttttgacaacgatgaacgatcctactcaggtgtcctggactgtggaaac
tgctccaggatgtatcgtggtgagaagttgccaaacaccaacctggtgttcctgatcact
gatgccaaggcgacatgtttgtcatgtgaccccaggccgctacgacaggctgaacaacct
tccgaaggtccagatccatgcgagctggctcagaacccgagataccgcaaagggccagat
gcgtgttttgacaacaatgaaaatgatgagcccttgtgtccaatcagcagaggttctgcc
ttgagctccgcaccgcccgtcttgtttctgctgctcagttcagggttggtgtctgtagga
gcttcaccgcttattctgccctga
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