Hippoglossus hippoglossus (Atlantic halibut): 117763330
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Entry
117763330 CDS
T07778
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117763330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117763330
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117763330
Intermediate filaments
Intermediate filament-binding proteins
117763330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
CH_2
Mfa_like_1
Motif
Other DBs
NCBI-GeneID:
117763330
NCBI-ProteinID:
XP_034444245
LinkDB
All DBs
Position
6:complement(17299975..17323635)
Genome browser
AA seq
2744 aa
AA seq
DB search
MSNNYGDEQLPPQYYQATDFGEEEDDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCV
NKTVTDLQRDFTDGLKLISLLEVLSQKKMYRKCHIRPNFRQMKLENVSMALEFLDREHIK
LVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEETKKLTPKQRLLGWIQNKV
PQLPINNFNRDWRDGKALGALVDNCAPGLCPDWAEWDPNQPVENAREAMQQADDWLGVPQ
VIAPEEIVDPDVDEHSVMTYLSQFPKSKMKPGAPLRPKQLFPNKAKAYGPGIEPHGNKVL
QPAVFTVETLEAGSGEVLVYVEDPEGHKEEAKVKPNKDKNRTYTVTYVPKVEGVHKVKVL
FAGQDIDKSPYTVNVAKDLGDASKVHARGPGLEATGNVTNKPTYFDIYTAGAGNGDVSVV
IVDPQGKKDTVELILENKGDSVFRCTYRPMLEGPHTIHILFAGQEIPKSPYTVNVLEALP
IAPPMGAPLQIIPQSVRTLPGVKGGKGAPPPKPGRPTTNPNACRATGRGLQPKGVRVKEV
ADFKVFTKGAGSGALNVSVKGPTGAEEQVKVRDAGNGVYECEYFPLKRGKYTVSITWGGQ
PIPRSPFEVEVGAEAGFQKVRAWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQA
KIECDDKGDGSCDVRYWPTEAGDYAVHVVCDDEDIKDSPFMAHILPAVNDVFPEKVKAYG
PGLQPTGIIVNKPTEFTIDARMAGKSTLKIYAQDAESCTINIKITDKGDGTFLCVYTPVK
PIKHTIIITWGDVNVPKSPFRVLVGEGSHPDKVKVYGPGVEKTGLKANEPTYFTVDCGEA
GQGDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGRYTIMVLFADQEIPI
SPFKVKVDPSHDAGKVRAEGPGLNKTGVEVGTPTHFTIYTKGAGKAKPEVHFTAPGPGEA
VRDFEIIDNHDYSYTVKYTALQQGNMTISVTHGGDPIPKSPFHITVAPPLDIGKVKVDGL
DTKVEVGKDQEFSVNTKGAGGQGNVGVKMTSPSGRPIPCKLESDKAKGAHSVKYIPPEEG
QYKVDVSYDGNPVMGSPFGVEAVMPADPSKVRAYGPGLKGGIVGKPAPFTIDTKAAGAGG
LGLTVEGPCEAKIECQDNGDGTCSVSYLPTEHGEYAINILYAEQHIPGSPFKAAVRPAFD
PSKATASGPGLEKAKAGEPATFTVDCTRAGDAELTIEIVSETGVKAEVHIQKTAEGTFSV
TYIPSFHGAHTITIKYGGHTIPQFPKVLQVEPSVDTSGVHVYGPGVEPRGVLREVTTHFI
VDTRALNKAGGNHVKVHIISPSGTNTESFITDKGDGTYRVEYTAFEDGMHLIEVLYDDAP
VPKTPFRVSVVEGCDPTRVRAFGPGLEGGITNKSNCFTVETRGAGTGGLGLTIEGASEAK
ISCKDNKDGSCSVEYVPFTPGDYDVNINYGGHPIPGSPFRVPVRDPVDPSKVKCSGPGLG
GGVRAHIPQTFTVDCTQAGQAQLDVKLYGPTGTVEPVGVKNNSDGTHTVHYTPAQDGPYT
VGVKYADQEVPHSPFKVMSQPGHDASKVRASGPGLDTKGVSASFPVEFTIDARDAGEGLL
TVQILDPEGKPKNATIQDNRDGTYTVSYVPDSTGPYTITIKYGGDEIPYSPYCIQSLPTG
DASKCRLTVSIGGHGMSSLQKLQTSEDTVITVDAKAAGKGKVTCKVLTPQGMELDMDVVE
NHDGTFDIYYTAPEPGKYVITIRFGGQNIPKSPFHVMASNEPVAPRDTVDPLFRPVNFLV
PFTPQQGEITGEVRMPSGKTARPHITDNKDGTITIKYQPIERGLHEMDIKYDGNHIPGSP
LQFYVDAVNSGVVTAYGPGLSYGMVNKSATFTVVTKNAGEGGLSLAVEGPSKAEITCKDN
KDGTCTVSYLPTTPGDYNIIVKFDNKHISGSPFTAKITGDDSITRTSQLNVGTSADVSLK
ITETDLSSLTASIKAPSGNEEPCLLKRLPNRHLGISFTPKEVGEHEVSVRKNGLHVANSP
FKIMVGQSEIGEASRVKAFGKGLMEAHTFEITEFFVDTRNAGYGGLALSVEGPSKVDINC
EDVEDGTCRVTYCPTEPGSYIVNIKFAEKHIPGSPFTVKVTGEGRIKESITRKRQASSIA
SVGSTCGLNLKIPGNWFQMVSAQERLTKTFTRSSHTYTRTERTEISKTRGGETKREVRVE
ESTQVGGGGTPFRDVFGDFLGRESLSSFAGITARPEVESGSQAMTAQVTSPGGKTVDADI
VDGGSSTYSVRFIPQEMGPHTVNVKYRGQHVPGSPFQFTVGPMGEGGSHKVRAGGPGLER
GVAGAPSEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVSYIVKEPGDYEVSIK
FNNEQIPDSPFIVPIATLSDEARRLTVTSIHEKDLKVNHEASFMVQRNGTRGVVDAKVHT
PSGSSEECYVTELDSDKSAIRFIPRENGVHSIDVKFNGCHIPGSPFNVRVGDLGLIGDPG
MVTAHGAGLQGGTTGVASDFVVNTCNAGSGTLSVNIDGPSKVKMDCRESPEGYKITYTPM
APGNYLVTIKYGGPQHIVGSPFKAKITGARLSGGHSLHETSSVLVETVTKSSKVGGAYSA
SSSSATSTKLTSDASKVVCHGAGLSKALVGQKNTFTIDSSKAGSNMLIVGVHGPNTPCEE
VYVKHMGNKLYNVTYTVKDKGSYTVIVKWGDDNVPGSPYKVAVP
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaactacggcgacgagcagctgcccccgcagtactaccaggccaccgacttt
ggggaagaggaggacgacgagatgccggccacggagaaggacctggccgaggacgcgcca
tggaagaagatccagcagaacaccttcaccaggtggtgcaacgagcacctcaagtgcgtc
aacaagaccgtcaccgacctgcagagggattttactgacgggctgaagctcatctcactg
ctggaggtgctgagccagaagaaaatgtacagaaagtgccacatcagacccaacttccgt
cagatgaagctagaaaatgtttctatggcactagagttcctggacagggagcacatcaaa
ctggtctccatagatagcaaagccattgtggacgggaatctaaagctgatcctgggtctt
atctggaccctcatcctccactactctatctccatgcccatgtgggacgacgaggacgac
gaggagactaagaaactgacccccaaacagcgcttgttgggctggatacagaacaaagtg
ccccagctgcccatcaacaacttcaaccgtgactggcgggacggcaaagccctgggagcg
ctggtcgacaactgtgcccccggtttgtgtcctgattgggcggagtgggacccaaaccag
cccgtggaaaatgccagagaagccatgcagcaagctgacgactggctgggtgtgcctcag
gtgattgcacctgaggagattgtggacccagatgtggacgagcactcagtgatgacctac
ctgtcccagttccccaagtccaaaatgaagcctggcgctcctctcaggcccaaacagctt
ttcccaaacaaggctaaagcctacggaccaggtattgagcctcatggcaacaaggtgctg
cagccggccgtgttcactgtggaaactctggaagctggaagcggggaggtcctggtctat
gtggaggatcctgagggacacaaagaggaggctaaagttaaacccaacaaggacaaaaac
agaacctacactgtcacctatgttcctaaagttgagggtgtccacaaggtgaaagtgctg
tttgcgggtcaggacatagacaagagcccatacactgtgaacgtggcgaaggatttgggt
gacgccagcaaagtccatgctagaggaccaggtctggaggccacaggcaatgtgacaaac
aaacccacctactttgacatctacacagcaggtgctggcaatggcgatgtcagcgtggtc
attgtcgatcctcagggcaagaaggacaccgtcgagctcatcctggagaataagggcgac
agcgttttccgttgcacctatcgtcccatgttggagggccctcacaccatccacatactc
tttgcaggccaggagatccccaagagcccttacactgtcaacgtcttggaggctctgccc
attgctcctcccatgggagctcccctgcagataatccctcagtcagtgcgcacccttcct
ggagtgaagggtgggaagggggctcctcctccaaaacctggccgcccaaccacgaatccg
aacgcctgcagagctacaggtagaggccttcagcctaaaggcgtgagagtgaaggaggtt
gcagacttcaaagttttcaccaagggagctggcagcggtgcgctgaacgtctcagtcaaa
ggaccaactggagcggaggagcaagtgaaagtgcgtgatgccgggaatggcgtatacgaa
tgtgaatatttcccccttaagcgtggtaaatacaccgtcagcatcacctggggaggccag
cctatcccacgcagccctttcgaagtggaagtgggtgcggaggcaggttttcagaaggtg
agggcctggggtcctggtctgaagactggcatggtgggaaaatccgctgactttgtagtg
gaggccatcggcactgaagttggcactctgggcttctccattgaaggcccatcacaggct
aaaattgagtgtgatgacaagggcgatggctcctgtgatgtacgctactggcccactgag
gctggtgactacgctgtccatgtcgtctgtgatgatgaggacatcaaggacagtcccttc
atggcccacatcctccctgcagtcaatgacgtcttccctgagaaggtgaaagcctatgga
ccaggtctgcagccaaccggcatcatcgtgaacaaaccaactgaattcacaattgatgcc
cgcatggctgggaagagtaccctcaagatctatgcacaggatgctgaaagctgcaccatc
aacatcaagatcactgacaagggagacggcacatttctgtgtgtgtacactcctgtcaag
cccattaaacacaccatcatcatcacatggggggatgttaacgtgcccaagagccccttc
agggtgctggttggagagggttctcatccagacaaagtcaaggtctatgggcccggagta
gagaagactgggctcaaagctaacgagccaacgtacttcactgtggactgcggcgaggcc
ggtcaaggggacatcagcattggaatcaagtgtgccccaggagtggttggacctgcggag
gctgacatcgactttgacatcatcaagaatgacaatgacaccttcactgtcaagtacact
ccccccggcgcaggccggtacaccatcatggtgctgtttgctgaccaggaaattcccatc
agtccattcaaagtcaaagttgatccttcccatgatgctggcaaggtgagagcagagggt
cctggactcaacaagacaggagtggaggtgggcactccaacccacttcaccatctacaca
aagggagctggcaaggccaagcctgaggtgcatttcacagcgccgggcccgggagaggcg
gttcgtgactttgagatcatcgataaccacgattactcctacactgtcaagtacacagct
cttcaacagggcaacatgactatttcagtgactcatggaggagaccccattcccaagagc
ccgttccacatcacagtggcaccacctctggatattggaaaggtgaaagtggatggattg
gacaccaaagtggaggtcggaaaggatcaagagttctcagttaacacaaagggcgccggt
gggcagggcaacgtaggcgtgaagatgacctcaccctctggccgcccgattccatgcaag
ctggagtctgacaaagccaaaggcgctcacagtgtgaagtatattcccccagaggaggga
cagtacaaggttgatgtcagctacgatggcaaccccgtaatgggaagcccctttggggtt
gaagcagtgatgcctgctgatccttctaaggtgagagcctatggcccaggcctgaaggga
ggcattgtgggtaaacccgctccattcactattgacacaaaggcagccggtgcaggtggg
ctgggcctgacagtggagggcccctgtgaagctaaaattgaatgtcaggacaacggcgac
ggcacatgctcagtgtcctacctgcccaccgagcacggggagtacgccatcaatatcctg
tacgcggagcagcacatccctggctctcccttcaaggctgcagtgcgcccggccttcgat
cccagcaaggcgacagcgagcggtcccggtctggagaaggccaaggcaggcgagccagcg
accttcactgtggactgcacccgagcgggcgacgccgagctcaccatcgagattgtgtcg
gagacaggggttaaggccgaagtgcacatccagaaaactgcagaggggaccttctctgta
acgtacatcccatccttccacggcgcacacaccatcaccatcaagtacggcggccatacg
attcctcagtttcccaaggtgctgcaggtggagccctctgtggacaccagcggggtgcat
gtctacgggccaggagtggagcccagaggggtcctcagagaagtcacaacccactttatc
gtcgacacccgcgccctcaacaaggctggaggaaaccatgtgaaggttcacatcatcagc
ccctccggcaccaacacagagagcttcatcaccgataagggagacggcacatacagagtg
gagtacacagcgttcgaggatggaatgcatctgatagaggtgctttacgatgacgcgccc
gtacccaagactcccttcagagtgtctgtggtggagggatgtgatcccacccgggtccgc
gcctttggcccaggtctggaaggaggaataaccaacaagtccaactgcttcactgtggag
accaggggcgctggtacaggaggcctgggcctgaccatcgagggagcctcagaggccaaa
atatcctgcaaagacaataaagatggcagctgcagtgtggagtacgtccccttcactcct
ggagattatgacgtcaacatcaactacggaggtcacccgatccctggcagcccgttccgc
gtgccagtgagggaccccgtggaccccagcaaagtgaagtgctcaggtccaggtctgggc
ggcggagtaagagcccatattcctcagacgttcacagtcgactgtacccaggctggacag
gcccagctggatgtcaaactctacggcccaacaggtaccgtggagccagtaggtgtgaag
aacaacagtgatggaacccacacagttcactacaccccagctcaggacggcccttacact
gtcggtgtcaaatatgcagatcaggaggtcccacacagcccattcaaggtgatgtcccag
cccgggcatgatgccagtaaggtgcgtgccagtggccccggtctggacaccaaaggtgtg
tctgctagttttcctgtggagttcaccatcgatgctcgtgatgctggagagggactgctc
actgtgcagatcctggacccagaagggaaaccaaagaatgcaaccatccaggacaacaga
gacggcacctacactgtgtcgtatgtacctgactctacaggcccctacaccatcaccatt
aaatatggcggagatgagatcccttactccccatactgcatccagtcgctgcccacagga
gacgccagcaagtgtcgcctcactgtgtcgattggaggacatggcatgtcgagtctacag
aaactgcagacctctgaggatactgttatcactgtggatgccaaagctgccgggaaaggc
aaggtgacctgtaaagtgctgaccccacaggggatggagctggacatggacgtggtggag
aatcatgatgggacctttgacatttactacactgcccccgaacctggaaagtatgttatt
actatccgctttgggggccagaacatccctaagagccccttccatgtgatggcctcaaat
gagccagttgctccccgcgataccgtggatcctctcttccgccccgttaacttcctcgtc
cccttcacgccacagcagggagaaatcacaggtgaggtgcgaatgccttcgggcaagact
gctcgcccgcatatcactgacaacaaggatggcaccatcaccatcaagtaccagcccata
gagagaggcctgcacgagatggacatcaaatatgacggcaaccacattccaggaagccct
ctgcagttctatgttgatgctgtgaacagtggagtggtgactgcttacggtcccggtctg
agttacggcatggtcaacaagtctgccactttcactgtggtcaccaagaatgcaggagaa
ggtggtctgtcactggcagtggagggtccctctaaggccgagatcacctgtaaagacaac
aaagatggaacctgcactgtgtcctacctgcccacgactcctggagactacaatatcatc
gtcaagtttgacaacaagcacatttctggcagtccctttactgctaagattactggggac
gactccatcaccaggacgtcccagctgaacgtgggcacatcggctgacgtgtccctgaag
atcacagagactgatctgagctctctgactgccagtatcaaggctccatcaggcaacgag
gagccctgcctgctcaagagactgcccaacagacacctcggtatctccttcacccctaag
gaggttggtgagcatgaggtcagcgtgaggaagaatggcttgcacgtagctaacagccct
ttcaagatcatggttggccagtcagagatcggcgaggccagtagggtcaaggctttcggt
aaaggcctcatggaggcgcacactttcgaaattactgaattcttcgtggatacaaggaat
gcgggttacggaggtctagcattgtcggttgagggtccgagcaaagtggatatcaactgt
gaagatgtagaggatgggacgtgcagagtgacatactgtccaacagaacctggcagttac
attgtcaatatcaagtttgctgaaaagcacatcccaggaagtcctttcacagtgaaggtg
actggagaaggaagaatcaaagagagcataaccaggaagaggcaggcgtcttctattgcc
tcagtgggcagcacatgtggcctgaacctcaaaatcccaggaaactggttccagatggtt
tcagctcaggagaggctgaccaagacattcacccgcagcagccacacctacacccgcact
gagcgcacggagatcagcaaaacccgtggcggcgaaaccaagagggaggtacgagtggag
gagagcacccaggtgggcgggggaggaaccccgttcagagacgttttcggagactttctg
ggcagggagagcctcagcagctttgccggcatcacggccagacctgaggttgagagcggc
tcgcaggccatgacggctcaggtgaccagccccggtgggaaaacggtggatgctgacatc
gtggacggagggagcagcacctacagcgtccgcttcatccctcaggaaatgggaccccac
acggtcaatgtcaaatacagaggccagcatgtccccgggagccccttccagttcacggtt
gggcccatgggggagggaggatcacacaaggtccgtgcaggagggcccggcctggagagg
ggcgtagctggagcaccctctgaattcagtatctggactagggaggcaggcgctggcggc
ctttccatcgccgtcgagggcccgagcaaggctgaaatttcctttgaggacagaaaagac
ggttcttgcggagtctcctacatagtgaaagaaccaggtgactacgaggtctccatcaag
ttcaacaacgagcagatccccgacagccccttcatcgtaccgatcgctacactctcagac
gaggctcgcaggctcactgtcacaagcattcacgagaaggacttgaaggtgaaccatgaa
gcctccttcatggtgcagcggaacggcactcgaggtgtagtagacgctaaggtccacacc
ccctctggctcctctgaggaatgctatgtcaccgagcttgacagcgacaagagtgcaatt
cgcttcattccacgggagaatggagttcactccatagacgtcaagttcaatggatgccac
attcctggaagcccctttaatgtacgagtgggagacctggggctgattggagacccaggc
atggtgacggcacatggtgctggactacaggggggaaccacaggtgtagcctcagacttt
gtggtcaacacctgtaacgcgggctcgggcactctatccgtcaacatcgatgggccgtcc
aaagtgaagatggactgccgcgagagtcccgagggctacaaaatcacctacaccccaatg
gcacctggcaactatctggtcaccatcaaatacggcgggccgcagcacatcgtgggcagc
cctttcaaagctaaaatcacaggtgcccggctctcagggggacacagcctccatgagacc
tcctctgtcttggtcgaaacagttaccaagtcttccaaagtgggtggagcctacagcgcg
tcctcctcctctgccacctcaaccaaactgacatccgacgccagcaaggtggtctgtcat
ggagcggggctgtccaaagctttggtgggacagaagaatacttttacaattgacagcagc
aaagcaggtagcaacatgctgatagtgggcgtgcacggacccaacactccgtgcgaggag
gtgtacgtcaagcacatgggcaacaagctctacaacgtcacctacactgtcaaggacaag
ggcagctacaccgtcattgtcaaatggggagacgacaacgtccccgggagcccctacaaa
gtggctgtgccctaa
DBGET
integrated database retrieval system
