Hippoglossus hippoglossus (Atlantic halibut): 117763667
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Entry
117763667 CDS
T07778
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117763667 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117763667 (tdg.1)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
117763667 (tdg.1)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117763667 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
117763667
NCBI-ProteinID:
XP_034444896
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All DBs
Position
6:complement(20437213..20446712)
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AA seq
451 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVQSAQQFHALQAQYSGFNHNQQFHYSDTQTGDAAMANMAN
PEPMMDQPEPASLAKAPAKKRGRPAQPKAPKPPKPPKIPKAPKPPKDPNAPKAKPGPKPK
KGAEAPADGKQEKIDESFKKVKRKVDRFKGMSEEEVMKKTLPDLLDYNLDYVIIGINPGL
MAAFIGRWFPGPGNHFWKCLFLSGFTEELLNHMSDTTLPVKYKMGFTNMVERATPGSKDL
STKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCREMYGKKPKKLDFGLQPHTIPDCD
VALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVKKSTEIQEVDYAFDLKLAKED
AKRLAIKEENYDPGYEDAYGGAYAERGPEGPQAQTQTNGHCTFSTAENTEGAQEASTSQI
AEGQLPDGQWMTQSFADQIPDIDGGVKDASA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatcactgcctgttgtgtccccggagtatcttcatcagtgg
gttcagtctgctcagcagttccacgctctacaggcgcaatattcaggcttcaaccacaac
caacagtttcactactcggatacacagacgggagacgcagccatggccaacatggctaat
ccagagcccatgatggatcaaccagaacctgctagcctggcaaaagctccagccaaaaag
agaggcagaccagcccaacccaaggcaccgaagccacccaagccaccgaaaatacctaag
gcaccaaagccgcctaaagacccaaatgcgcctaaagccaaacccggccctaagcccaag
aagggcgctgaggctccagcagacggcaaacaggagaagatagatgagagcttcaagaag
gtgaagcggaaagttgaccgcttcaagggaatgtcagaagaggaagtcatgaaaaaaact
ctaccagacctgctggattacaacctagactatgtcattattggtatcaatccagggctg
atggcagctttcattggacgttggtttcctggacctggaaatcatttttggaagtgcctg
tttctgtccggatttactgaggagctgctcaaccacatgagcgacaccaccctgcctgtc
aagtacaagatgggtttcacaaacatggtggagagggcaacaccagggagcaaagacctc
tcaactaaagagttacgtgaaggaggcaaaattctcgtagagaagttgaagaaatacaag
cctcttattgctgttttcaatggaaaatgcatctatgaaatgttctgcagagagatgtat
ggtaaaaaaccaaagaaacttgactttggtttgcaaccgcacacgatcccagactgtgac
gtggctctgtatctgatgccttcctccagcgctcgttgcgctcagttccctcgtgctcag
gacaaagtacacttctacatcaagctgagggagctccgggatcagctgaagggcgtcaaa
aaaagcacagagattcaggaggttgactatgcatttgacctgaagctggctaaagaggat
gccaagaggttagccataaaggaggagaactatgaccctggttatgaagatgcttatggc
ggagcatatgctgagagaggacctgaagggccccaggcccagacccagaccaatggtcac
tgtactttctcaactgcagaaaacacagagggagcacaggaggcgagcacatcacaaata
gcagagggccagcttccagacggacagtggatgacccagtccttcgctgatcagatcccg
gacatcgatggtggcgtgaaagacgccagcgcatga
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