Hippoglossus hippoglossus (Atlantic halibut): 117764501
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Entry
117764501 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117764501
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
117764501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_Prp19
EIF3I
TPR_IF140-IFT172
PEP5_VPS11_N
TPR_GEMI5
Beta-prop_WDR35_TULP_N
WDR55
Zn_ribbon_IFT122_C
Beta-prop_WDR35_2nd
WDR90_beta-prop_4th
eIF2A
WD40_RFWD3
Zn_ribbon_19
WD40_like
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
117764501
NCBI-ProteinID:
XP_034446232
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Position
7:complement(19877205..19892574)
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AA seq
904 aa
AA seq
DB search
MKYKVSSEITCCAWTNDGQYLALGMMNGVVSIRNKRAKEKVKIERPGGSSSPIWSVAWNP
SKDEHNYILAVADWGQKLSFYQLSGKQIGKDRTLNYDPCCVTYSSEGEYIVMGGSNKQAS
LYTKDGMRLSTIGEQNSWVWTCRVKPDSNFVVLGCQDGTIACYQLISSTVYGLYKDLYAY
RDGTTEVIVQHLITEQKVRIKCQELVKKIAIYRNLLAIQLPEKIVIYELYSDDSSDMHYX
IKENICTEPKCNLMAVCSEHIILSQEKRLQCLSFTSVREKEWVMESLIGYIKVIGGPPGR
EGLLVGLKNGAILKIVLDDQLPITLLKLSTSVRCLDMSASCKKLAVVDEHNTLLVYDINS
KELLFQEPNANSVAWNTQCEDMLCFSDSGYLNIKAIDFPVQQQKMQGFVVGYNGSKIFCL
HDNSLLEAEVPQEFVKEMDTQHTGILTTKPADWAKSSEEPRAAAEMYLSAGEHLKAIDII
GEHGWADMLIDIARKLNKAEREPLGKCALYFKKLKHHGYASEIYSKMGDLQALMHLHVET
RHWEEAFSLVENHPQFTSDVFVPYAEWLTKKGRFEGAQEAFHKAGRQNESVKVLEQLTHN
AVVENRFNDAGYYYWMLSMQCLDIAREDEEQRDEMLKKFEHFQHLAELHHVYRFIQRYTD
EPFSSHMPETLFNICRFLLNNLTKDKPRGISEVSILYALVKXKLGAYKLARYCYEKLQEL
YIPSRLQDSIELGSLKLRSKPCRDSEGVFNAMMCYRCSTINPLLNKQGSVCNNCRQPFIY
SASSYEVLPLVQFYLEDNITDEEAARLVDMEVPHMKDVDNELQPLRLDEAADEAEFDPFT
AKMSFEQGGSNFVPIKVSRSALRSMSRRDVLIKRWPRPLKWEYFRSLLPDVSITMCPTCF
KMFR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaagtcagcagcgaaataacatgttgtgcgtggacaaacgatggtcagtac
cttgcccttggcatgatgaatggagtcgtgagcatacgaaacaagagggcaaaggagaag
gttaagatagagcgtccgggaggctcctcctctcccatctggtctgtagcctggaaccct
tctaaggatgagcacaattacatcctggctgtggcagactggggtcagaagctctccttc
tatcagctgagtggaaaacagattggaaaagacaggacgctcaactatgacccgtgttgc
gtcacctactcctctgagggcgaatacatagtcatgggtggttctaataaacaggcctcc
ctctatactaaagatggaatgcgactcagcaccattggcgagcagaattcctgggtgtgg
acgtgccgggtgaagcctgactctaactttgtggtgttgggctgccaggatggaaccatt
gcctgctaccaacttatctccagtacagtttacggcctctacaaggatctctatgcttat
agagacggcacgaccgaggtcattgtccagcacctcatcacagaacaaaaagtgaggatc
aaatgccaagagctggtgaagaagatcgccatctacagaaacctcctcgccatccagctg
cctgagaagatcgtcatctatgagctttattcagatgactcatcagacatgcactacnnt
atcaaggagaacatttgcacagagcctaaatgcaacctaatggcagtctgctccgagcac
atcatcctgtctcaggagaagcggctccagtgtctgtccttcaccagtgtcagggagaaa
gaatgggtgatggagtccctaattggctacatcaaagttatcggtggtcctccaggcaga
gagggtctattagttgggctgaagaatggagctatcctgaagatagttcttgacgatcag
cttcccatcacgctgctgaagctgtcaacttcagtgcgctgcctggacatgagcgcctcc
tgcaaaaaactggctgtggtggacgagcacaacactctgctggtctacgacatcaacagc
aaagaactgctttttcaggagcctaatgctaacagtgtggcttggaacacccagtgtgaa
gacatgttgtgcttctccgacagtgggtaccttaatatcaaggccattgatttcccagta
caacagcagaagatgcagggttttgtggttggctacaatggctcgaagatcttctgcctc
catgacaattctttgttagaagcggaggtacctcaggagtttgtcaaagaaatggacact
cagcacactgggatcctgacgaccaagccggcagactgggctaagagcagcgaggagcct
cgggctgcagcagagatgtacctgtcagctggagagcatctcaaagccattgacatcatc
ggcgagcatggctgggcagacatgctgatcgatattgctcgtaagttgaacaaggctgag
cgcgagccactgggaaaatgtgcactctacttcaagaagctgaagcaccatggctatgcc
tcggagatctattccaagatgggggacttgcaggctctgatgcacctgcatgtggaaacc
cggcactgggaagaggccttctcactggtggagaatcacccccagttcacaagtgacgtc
tttgtgccttatgctgagtggttgactaagaaaggtcgtttcgagggggcacaggaagca
tttcacaaggcggggcgacagaacgaatctgtgaaagtcctggagcagcttacccacaat
gcagtggtggagaacaggttcaatgacgctgggtactactactggatgctgtctatgcag
tgtctggacatcgccagagaagatgaagagcagagggatgagatgctgaagaagtttgag
cattttcagcatcttgctgaactccaccacgtctatcgctttattcagcgttacacggat
gagcccttcagctcccacatgccagagacgctcttcaacatctgcaggttcctcctgaac
aacctcaccaaggacaaaccacgaggcatctctgaagttagcatcttgtatgcactggtg
aagnaaaagctgggtgcatataaacttgccaggtattgttatgagaagctccaggagttg
tacattccctctcgcctccaggactccatcgagctgggcagcctcaaacttcgcagcaaa
ccctgcagggacagtgagggtgtctttaatgccatgatgtgctaccgctgctccaccatc
aaccccctgctgaacaaacaggggagtgtgtgcaacaactgcaggcagcctttcatctac
tcagcttcttcatatgaggtgctgcccctggtccagttctacctggaggacaacatcact
gatgaggaggctgcccgacttgttgacatggaggttcctcacatgaaagatgtggacaat
gagctgcagcctttgaggctggatgaggctgcagatgaagcagagttcgacccattcact
gccaaaatgagctttgagcaggggggctcgaactttgtccccatcaaggtgagtcgctca
gcgctgcgctccatgagcaggagggacgtcctgatcaaacgctggcccaggccgctcaag
tgggaatacttccgctccctgctgccagatgtgagcatcaccatgtgccccacctgcttc
aagatgtttcgttga
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