Hippoglossus hippoglossus (Atlantic halibut): 117766226
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Entry
117766226 CDS
T07778
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117766226 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117766226 (smcr8a)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117766226 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
117766226
NCBI-ProteinID:
XP_034448969
LinkDB
All DBs
Position
8:complement(19669521..19676164)
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AA seq
947 aa
AA seq
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MIGSPDVVAFTKEDEFGPTGPDPWALPEEFSVPLHPLADSNPWAKTSFAKFTKDFILISE
FSEQVGPQPLLTIPPDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFLQASEC
LKAGNRRAFAKELQRKLQDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSFHCRPRRDPHAVTCQKCMTQCLSECETLLEKYAKLANPFCYTDTGRK
GDEGQGQINDEAGKEEVVQDDDEGVKRRPSYTPQLIKAKSAKCFDKRLKTMQELCDDTFY
EATMGLLKETERSFRGDLCYLHTRRLDKSLRRRQRITNFLFEEDLGDDAEDEGGVLRPFC
AVNHAVNNFTLSNPPPIVLGPEPLELDSLAPPDPRDPTSETSHTQESELGLGMSHLDSSP
SDQTQESSDGTKGSFSSDKSGMGPAEKQQSLASVRSEHPDPDPDPDSDLTPDPDHNTDLE
RESSSEDMETTAGEDEGDNGGDDTPVSLLEVVSELEASREDDCERVSEIESDLLVPIDTA
CCMSQEGFLYEASAPEKNPHLDQSSNHQSSPTAVVNQEPQSLPLLQDYYAVGSLSSENKA
SGLELPVGLLGDAVSRTSAEDGSDCTMSASTGSDRAASPLGYGAVMTLRHRKKAGQGALR
FVRQYPFAIQALLCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGERVQAWLSCPF
TLTDLQRWKLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIAD
HRTYIRRGSTYFLHVQSTLCRLAAKAFLFTFTHHLHLPVSSTEGPEVVEGRRLCFLQEQL
GLGEEDSQILLCLSQLITQQYLQPATGSSALAPCFSFNYTTSVLYKI
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggctttcactaaagaggatgagtttggtccgaccggc
ccggacccctgggctctccctgaggagttctccgtccccctccatcctttggctgactcc
aacccctgggccaaaacctccttcgccaagttcaccaaagacttcatcctcatctcggag
ttctccgagcaggtgggccctcagccgctcctcaccatcccacccgaccccaaagtctgc
ggcacgttcgatctcaactacttctcccttcgcatcatgtcagtggactaccaggcctcc
ttcgtggggcatccaccaggcagtggctacccaaggctcagcttcgtggaggactcgagg
gtggtgttgggcgactcgaaggaaggggcattcgcttacgtccatcacctcacgctgtac
gacctggaggcgaggggctttgtgagaccgttctgcatggcatacgtgtcagccgacgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttcctgcaggcgtctgagtgt
ctgaaggctgggaacaggagagccttcgccaaggaactgcagaggaagctccaggacctg
gagtacactcactctgtgctgcagagagaggagggcctgcagagggaggcggggcctcag
tgcatgtactccgctcacgccgtagagaaagccaatgagctcgccaacgttgaaaagagc
atctacgaacacagggacctgctgaggcagatcagctccttccactgccgcccgcgcaga
gacccgcacgctgtcacctgtcagaagtgtatgacacagtgcttgagtgagtgtgaaacg
ctgttggaaaaatatgccaagcttgccaaccccttctgttacactgacacaggaaggaag
ggggacgaagggcagggtcagatcaatgatgaagcaggcaaagaggaagtggtgcaggat
gacgatgagggcgttaaacgcaggccgtcttacacaccacagctgatcaaagctaagtcc
gccaagtgtttcgacaagcgcctgaagaccatgcaggagctgtgtgatgacactttctat
gaggccaccatggggctcctgaaggagacggagaggagtttccgtggcgacctatgttac
cttcacacacgccgcctggacaagtctttacgcaggagacagagaattaccaacttcctg
tttgaggaggaccttggtgatgatgctgaggatgaggggggggtactaagaccattctgt
gctgtgaaccatgctgtcaacaactttacactctcaaatcctcctccaattgtgctggga
ccagaacctctagagctagactcactggcgcccccagatccccgagacccaacttctgag
accagccatactcaggagagtgagctcgggcttgggatgagtcatttggattcctccccc
tcagaccagacccaggagagctccgacgggaccaaaggaagctttagcagcgataagagc
gggatgggcccggcagaaaagcagcaaagtcttgctagtgttaggtctgaacatcctgat
cctgatcctgatcctgattctgacttgacccctgaccctgaccacaacactgacctggag
agggagagcagcagtgaagatatggaaaccactgcaggggaggatgagggtgacaacggg
ggagacgacacacccgtgtccttgctggaagtggtgtctgagctggaggccagcagggag
gacgactgtgagagagtaagtgaaattgagtctgacttgttggttccaattgacacagca
tgctgtatgtctcaagagggtttcctttatgaggcatctgccccagagaagaaccctcat
ctggaccaaagctccaaccatcagtcctctccaaccgcggtggtcaaccaggagcctcaa
tcccttccccttctccaggactattacgcggtgggctctctaagctcagaaaacaaagca
tctgggctggagctgcccgtggggctccttggagacgcagtttcccgtacgtcagcagag
gacgggtcagactgcaccatgagtgcttctactgggtctgatcgtgctgcctcacctctc
ggctatggggcagtgatgaccctgcgtcacaggaagaaggctggacaaggagccctgagg
tttgtgcgacagtacccctttgccatacaagctcttttgtgcctgctgagtggcagaacc
ctggtggtgcttggggcagatgaggggagggtccgacggttggttgctgctctggccctc
ttcgttcccggccctgggaagtgcggcgagagggttcaagcctggctgtcctgtcctttc
acccttactgacctgcagaggtggaaactcattggtttgcaaagagtggcgtcccctgtt
ggttccagcatgctttactcgctgtcccgctacagccgctatatctccatccttgatgcc
gaccagaagaccttgcgctgcccgccgtatcgcggccagctgctggccaacatagccgat
catcgcacctacatccgccgtggctccacctacttcctccatgtacagagcaccctgtgc
cgcctggctgccaaagccttcctgtttactttcacccaccacctccacctgccggtcagc
tccacggaggggcccgaggtcgtggagggccgacgcctttgctttctgcaggagcagctg
ggactgggcgaggaggacagccagatactgctgtgcctcagccagctcatcactcagcag
tacctgcagcccgccaccgggagcagcgcactcgcaccttgttttagttttaactacacc
acgagcgttttatacaaaatctaa
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