Hippoglossus hippoglossus (Atlantic halibut): 117766491
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Entry
117766491 CDS
T07778
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03272
Virion - Hepatitis viruses
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117766491 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117766491 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117766491 (ldlra)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117766491 (ldlra)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Psg1
Motif
Other DBs
NCBI-GeneID:
117766491
NCBI-ProteinID:
XP_034449443
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Position
8:complement(20948662..20958240)
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AA seq
924 aa
AA seq
DB search
MRLPVRLKTMARPFYAPLLLLVCSLLQTHADVTTCGAKQFQCGNGKCITVRWVCDASDDC
GDGTDELPATCLARTCRPTEFSCQDRLNQCIPSTWRCDGKADCENGADEETCAPRRCTNN
EFQCRSGQCVSASFECDYEADCDDGSDEASCPATTCSPRAFQCNNTICVPRLWACDGDMD
CPDGSDEWPQNCGTRRPASPSPHQCTSLEFRCGSGECIHGSWKCDGGTDCHDRSDEANCD
RLTCRPDEFECGDGTCVHGSRQCNHQYDCRDRSDETGCVNATHCDGPTRFKCRSGECILM
EKVCDKNRDCRDWSDEPLRECGFNECLLNNGGCSHICKDLRIGFECRCPAGFSLVDERLC
EDIDECANPDTCSQICINQLGSYKCDCEEGYQVDPASKACKAIGTIAYLFFTNRHEIRKM
TLDKSEYTRVIPRLKNVVALDMNIATKEIYWSDISQKKIYRTQMDVADDSAHHSTVIGSD
IDAPEGLAFDWVHGNLYWTDSIRSTISVATADGSRRKTLFQRDLSKPRAIVVDPHSNFIY
WTDWGNPAKIEKGGLNGGDRSALVTDNIEWPNGITLDLLSQRLYWVDSKLHTLSSIDVQG
GGRHTLIIDELKLAHPLGLTVFEEKVYWTDVSNSAILSANRLTGADIVPVAENLSSPEDV
ILYHNLKQPAGRNWCQVSNGGCEFMCLAAPQVGRHPPKYTCVCPDNMMLARDMRTCVPAV
PTPAAPAQPQIPPTSPPRLPPAPPRTTPRATTRATPKPQVHTTTPVPVVITSSAAKAAPR
TTKPLVRTTTPQPRTTTPQPRTTTPQPVKPKIAQTTTEAPVTSPDVQPEFAAAVPKTASP
TPIALYIVLPLAIVCLVAVGAVLLWRNYRLKNTNTIHFDNPVYQKTTEDQVHIWRSNSPD
GYSYPKRQVVSLNEEADNPAFTEN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttccagtgcgtctgaaaaccatggcacggccgttttacgcgcctctgctgctc
ctcgtctgctccctgctccaaacgcatgcggacgtgacgacatgtggagccaagcagttc
cagtgtgggaatgggaaatgcatcacggtcagatgggtgtgtgacgcctccgacgactgc
ggcgacggcacagatgaacttcctgctacctgtttggctagaacgtgccggccgacggaa
ttcagctgccaggaccgtctgaaccagtgtatacccagcacctggcgctgtgatggaaaa
gctgactgtgagaacggagcagatgaggagacctgtgccccgaggcggtgcaccaacaac
gagttccagtgcaggagcggccagtgtgtgtccgcctccttcgagtgtgactacgaggcg
gactgcgacgacggcagcgacgaggcctcctgtccggccaccacctgcagccccagagcc
ttccagtgcaacaacaccatctgcgtgccgcgcctgtgggcctgcgacggtgacatggac
tgccccgatggctcggacgagtggcctcagaactgcggcacgaggcgtcctgcctctcct
agcccccatcagtgcacctccctggagttccgctgcggcagtggcgagtgcatccacggc
agctggaagtgtgacggaggaaccgactgccacgatcgatcggatgaagcaaactgtgat
cgtctgacctgtcgtcctgatgagtttgaatgcggtgatggaacttgcgtccatgggagc
cgtcagtgcaaccatcagtacgactgcagggacaggagcgatgaaaccggctgcgtcaat
gcgacccactgtgacggcccaaccaggttcaagtgccgcagcggggagtgcatcctcatg
gagaaggtgtgcgacaagaaccgcgattgcagggattggtcagatgagcctctgagggaa
tgtggctttaacgagtgcctgttaaacaacggcggctgctctcatatctgcaaagacctg
agaatcggcttcgagtgccggtgtcctgctggattcagcctggtggacgaaagactctgt
gaagatatcgacgagtgtgccaacccggacacctgcagccagatctgcatcaaccagctc
ggcagctacaaatgcgattgcgaggagggttaccaagtcgacccagcgagcaaagcttgc
aaggccatcggaacgatagcctaccttttctttaccaaccgccatgagatcagaaaaatg
accctggacaaaagtgagtacaccagagtgatcccccgtctcaagaacgtcgtcgcgctg
gacatgaacatcgccaccaaagaaatctactggtctgacatctcccagaagaaaatctac
agaacccagatggacgtggccgacgactccgctcatcacagcacggtcatcggcagcgac
atcgatgctcctgaaggcctcgccttcgactgggtccatgggaacctctactggaccgac
agcattcgcagcaccatctccgtggcaaccgcggacgggagccgtcgcaaaactctgttc
cagcgcgacctgtcgaagccccgggccatagtggtcgacccccacagcaacttcatctac
tggacggactggggaaatcctgctaagatagaaaaggggggtctgaacggaggagaccgc
tctgctctggtcacggacaacattgagtggcccaacggcatcacactggacctgttgagc
cagcggctctactgggtggactccaagctgcacaccctctccagtatcgacgtgcagggc
ggcggccgacacaccctcatcattgacgaactcaagctggctcacccactgggactcact
gtgtttgaggagaaagtttactggaccgacgtcagtaacagcgccatcctcagtgcaaac
aggctgacgggcgccgacattgtaccggtggccgaaaacctatcatcaccagaagacgtt
attctttaccacaacctcaaacaacctgctgggaggaattggtgccaggtttccaacggc
ggctgtgagttcatgtgcctggcagctcctcaggtgggacgacatccgcccaaatacacc
tgcgtctgtccggataacatgatgctcgccagagatatgaggacgtgtgtgcctgctgtt
cctacacctgcagctcctgcgcagcctcagattccacctaccagtcctcctcgtctgcca
ccggcgccaccgcggaccacacccagagccacaaccagagccacacccaagccccaggtc
cacaccaccactccagtgcctgtcgtaatcaccagctctgcagccaaggcagcaccacgc
accaccaagcctttggtcaggaccaccacaccccagccaaggaccaccacaccccagcca
aggaccaccactccccagccagtgaagcctaaaatcgcccagaccaccacagaggctccg
gtcacctctccagacgtgcaacctgaatttgctgcagccgtccccaagactgcctccccc
accccgatagctctgtacatcgtcctacctctggcgatcgtttgcctcgtggctgtcggt
gccgtgctgctgtggaggaactacaggctgaagaacaccaacaccattcactttgacaac
cccgtgtaccagaagaccaccgaggaccaagtgcacatctggaggagcaacagccccgat
ggttactcctacccaaagagacaagttgtgagcttgaatgaagaggcagacaatccagcc
ttcacagaaaactga
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