Hippoglossus hippoglossus (Atlantic halibut): 117767837
Help
Entry
117767837 CDS
T07778
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04137
Mitophagy - animal
hhip04141
Protein processing in endoplasmic reticulum
hhip04210
Apoptosis
hhip04217
Necroptosis
hhip04621
NOD-like receptor signaling pathway
hhip04622
RIG-I-like receptor signaling pathway
hhip04920
Adipocytokine signaling pathway
hhip05132
Salmonella infection
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117767837 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117767837 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117767837 (traf2a)
09143 Cell growth and death
04210 Apoptosis
117767837 (traf2a)
04217 Necroptosis
117767837 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117767837 (traf2a)
04622 RIG-I-like receptor signaling pathway
117767837 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117767837 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117767837 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
117767837 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117767837 (traf2a)
04121 Ubiquitin system [BR:
hhip04121
]
117767837 (traf2a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117767837 (traf2a)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117767837 (traf2a)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117767837 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
Sina_ZnF
zf-RING_4
zf-C3HC4_2
Tropomyosin
zf-RING_5
zf-C3HC4_4
MATH
zf-C3HC4_5
EFL1
zf-RING_6
zf_C2HC_14
FKBP15
Motif
Other DBs
NCBI-GeneID:
117767837
NCBI-ProteinID:
XP_034451666
LinkDB
All DBs
Position
9:complement(25888347..25899378)
Genome browser
AA seq
569 aa
AA seq
DB search
MAAQEPSPPSSLEGIRPGFPKKILANSLEDKHLCNSCHKVLRRPLQAQCGHRFCSFCFNK
IVSSGPQNCGACIKEDLFEEPTSILKQGGAFPDNAARREVESLAAVCPNEGCTWTGTIKE
FEASHEGNCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLDVASHKLQELHQSLRDLEQKMSQLGGGGGAAPVL
GACAPTLATSFTPLPSAVGAALELKLQSEKTKVAELSRRCQELELKVSTFENIVCVLNRE
MERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDG
IFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFV
VMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLF
CSLSKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggaaccgtctccaccatcttccctggaaggcatcagaccgggcttccca
aagaaaatcctggccaacagcctcgaagacaagcatctgtgcaactcgtgccacaaagtc
ctgagaagacccttgcaagctcagtgcggccatcgcttctgctccttctgcttcaacaag
atagtgagttccggaccacagaattgtggtgcttgcatcaaagaagatttatttgaagaa
cccacctctatcctcaagcaaggtggtgctttccctgataatgcagctcggagagaagtg
gagtccctggcagctgtctgtcccaatgagggatgcacgtggacgggaactatcaaagaa
tttgaggcgagtcatgagggcaactgtgacttcatgatcatcctgtgtccttcctgtaaa
gagctgatgagagccaacgaacaggaacgccacaacgagagagaatgtccagaaaggaca
ctcaactgcaaatactgcaaagaacccttcctgttgaagaacatcaaggctcatgacgaa
atctgtccaaagtacccgatgatttgtgaaggttgtgcaaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaaatttaaagctccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaagattcatgaccatgagcggcagtgttcc
tatgaacacctcaacctgctcctgcatttcatcatgggcatcaaggtgagccttgagagc
ctgcagccccagagccttgatgtggccagccacaagctgcaggaactccaccagtccctc
agggacctggagcagaagatgagccagctgggtggtggcggtggtgcagctcccgtgctc
ggtgcgtgcgccccgactctggccacctccttcaccccactgccaagcgcggtgggtgcc
gccctggagctgaagctccagagtgaaaagaccaaggtagcggagctgagccggcgctgc
caggaactggagctcaaagtgagcacgtttgagaacattgtctgcgtcctcaaccgagag
atggagcgctcctgcaccaccatggaggcctacaatcggcaacaccgcctggaccaggac
aagatagagatcctcaacaacaaagttcgtcagctggagaggactgtgagtctgagagac
ctgtccatcgtggagatggaggggaaaatgagagagatgtctgctgctacgtatgatggc
atctttgtctggaagatctcggatttcaccaagaagaggcaggatgctgtggctggccgt
gctcctgccatgttctctcctgccttttataccagtaaatacggctacaagatgtgcttg
cggatatacctgaacggtgatgggacaggccgagggacccacttgtctctgttctttgtg
gtgatgagaggacacagcgatgcactcctgaagtggccttttaatcagaaggtcacccta
atgctgcttgaccagaacaacagagagcacataattgatgccttccggcccgacatctcc
tcctcgtccttccagaggcccgtcagtgatatgaacatcgccagcggctgtccgctcttc
tgttcgctctccaaactggacactaaaaactcctacatacgcgatgacaccatcttcatc
aaggccatcgttgacctcacaggactctag
DBGET
integrated database retrieval system
