Hippoglossus hippoglossus (Atlantic halibut): 117768425
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Entry
117768425 CDS
T07778
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117768425 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117768425 (smcr8b)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117768425 (smcr8b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
117768425
NCBI-ProteinID:
XP_034452639
LinkDB
All DBs
Position
1:complement(24373390..24381401)
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AA seq
915 aa
AA seq
DB search
MIGSPDLLAFTGLEGFGEGDEDQGYAWPPEELSVPLLPPSHPWSCAALFHRDFILVAEFS
EQVGPKPVLTIPDDPRVIGSFDLNHFSVRIMSVDYQASGPVHASHASPGPRLNFSEDSEV
ILGDSAEDAFAYVHHLTLYDLEARGMVRPFCMAYVCSDLAKLMENFAELSACFARASDSL
KTGNRQAFSMELQRKLQELEYKRLTLLQQTKHLSTVNGFTEDAGQAADLESVERSILNHR
DLLRQVTSYPNRKLKQPDFLPYDPADSLTDPTALLPTEQSPPTPSPCRSEHSLKPLQELC
NDYFLSLTKEQLGDTERRLRGDRSVLRTVRVSRSLSRKLALTNFLFEYWSTENEEEEEKE
VAELPRASQSGVRWTSSEPMSLETFYSCVEEIPIKLEAGGTLTSDPSVVMEMAGSVSSSD
SIEVLGTEKSYRTQHDVDGSDSREAADSFLSSAETPVMLMDPPLRRVPVDTGARRGRAYA
RRANSEDSIEVLSTTESIFPDDLTAITEEEAEQQPLSNGFDDEEEETLTERRPEEKILNV
TGGGHEHGKEQFAQREEGDEDEPLKEITVGDGVEIKEEPVECWKKNQEREDESPEKTSNI
LQVHEAVEPMPNSSKVHQMFQWMDLHVNLAPPVAPAEADHWSPPRAPLRLPSIDEASDCA
SFTGSSDPPSPTQNIHINTRSDKRRRKAGLRALRFVKHNSFSHHAVFCLLSGRPLVVLGG
DESLVRKLVDALSLFLPAPDRNAVTPCLTTPLQLTDLLTWRLIGIHRSPSSSSSSIIHSL
SRYSRYLALLDLDQRTLRCPSYSGSLISRMADPHSGISRGVTYLLHLESCLTALVNQALL
YTFRPASRRPNAAGGPDSTGGKDDLYTPRLCSSEQDVRVMNFLSELIKQRHAGRGPPVLR
FSYSAVQLHRNTYTT
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtcaccggacctcctcgcgttcaccggcctcgagggcttcggggaaggggac
gaggaccaggggtatgcgtggccgccggaggagctctccgtcccgctgctgcctccctca
cacccctggagctgcgccgcgctcttccacagggacttcatcctggtggcggagttctca
gagcaggtgggtccaaagcccgtgctgacgataccggacgaccccagagtcatcggctcc
tttgacctcaaccacttctccgtccgcatcatgtccgtggactaccaggcgtccggcccc
gtccacgcctcccacgcctcccccggcccccgcctcaacttcagcgaggactccgaggtg
atcctgggagactcggccgaggacgcctttgcgtacgttcaccacctgaccctgtacgac
ctggaggcccggggcatggtgcgtcccttctgcatggcctacgtgtgctcggacctggcc
aagctgatggagaacttcgccgagctgtccgcgtgcttcgctcgggcgtccgacagcctc
aagacggggaacaggcaggcgttctccatggagctgcagagaaaactgcaagagctcgag
tacaagaggctgacgctgcttcagcagacaaaacatctgtcgactgtaaacggcttcaca
gaagacgcaggacaagccgctgatcttgaatctgtggagcgttccatcttaaaccacaga
gacctcctccgccaggtcacatcctacccaaacaggaagctcaaacaaccggacttcctg
ccctacgaccccgccgactccctcactgatcccactgctctgctgcccactgagcagagc
ccccccacgcccagcccctgcaggtcggagcacagcctgaagcccctgcaggagctctgc
aacgactacttcctctccttgacaaaggagcagctgggggacacagagcgccgcctccga
ggcgacaggagcgtcctgcgaactgttcgggtctcgcgttccttgtccaggaagctcgcg
ctcaccaacttcctgtttgaatactggagcaccgagaacgaagaggaggaggagaaggag
gtcgctgagctgccgagggcgagtcagagcggcgtcaggtggaccagctctgaacccatg
agcctggagactttctactcctgcgtggaggagatccccatcaagctggaggccggaggg
acgctgacctctgaccccagcgttgtcatggagatggcaggaagcgtgagcagcagcgac
agcattgaagtgctcggcacagagaaatcgtatcggacgcagcatgacgtcgatggatcc
gacagcagagaagcagctgacagtttcctctcctcagcagaaaccccggtcatgctgatg
gacccccccctcagacgagtcccggtcgacaccggtgccagacgcgggcgggcgtacgcc
agacgagccaacagcgaggacagcatcgaggtcctgagcaccaccgagtccatcttcccc
gacgacctcaccgccatcacggaggaggaggcggagcagcagcctctgagcaacggcttc
gacgacgaggaggaggagacgctgacagagcgcagacctgaggagaagatcctgaatgtg
accggtggaggacatgaacatggaaaggaacagtttgctcagagagaggaaggtgatgaa
gacgagcctctaaaggaaataactgtcggtgatggcgtcgagatcaaagaggagccagtc
gagtgctggaagaagaatcaagagcgtgaagacgagagtcctgagaaaacgtccaacatt
ctgcaagtccatgaagcagtggagccgatgcccaactcgtccaaagtccatcagatgttc
cagtggatggacctccatgtgaacttggccccccccgtggccccggcggaggctgaccat
tggtccccgccccgcgctcctctcaggctgccgagcatcgacgaagcgtcggactgcgcc
agcttcacaggctcctcggaccctccctcccccactcagaacatccacatcaacacccgc
tcagacaagaggaggaggaaggccggtctccgagccctgaggttcgtcaagcacaactcc
ttctcccatcacgccgtgttctgcctcttgagcggccggccgctggtggtcctcggagga
gacgagagcctggtgaggaagctggtggacgctctgagtctcttcctgccggcgcctgac
agaaacgccgtgacgccgtgtctgaccacgccccttcaactgactgacctgctcacctgg
agactgatcggaatacacagatccccctccagctcctcgtccagcatcattcactccctg
agccgctacagtcgttatctggctctgctggacctggaccagaggacactccgctgtccg
tcctactccggctccctcatcagcagaatggccgatcctcacagtggcatcagccgcggc
gtcacctacctgctgcacctggagagctgcctgaccgcgctggtcaaccaggctctgctg
tacacgttccgtcctgcttcacgccgtccgaacgccgcgggagggccggacagtaccggc
ggaaaagatgatctctacactccaagactgtgcagcagtgaacaggatgtgagagtgatg
aacttcctgtccgagctcatcaaacagcgccacgcaggacgcggacccccggttttgaga
ttctcctacagcgcggtgcagcttcacagaaacacgtacacaacatga
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