Hippoglossus hippoglossus (Atlantic halibut): 117768446
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Entry
117768446 CDS
T07778
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00310
Lysine degradation
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117768446 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117768446 (prdm6)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117768446 (prdm6)
Enzymes [BR:
hhip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117768446 (prdm6)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117768446 (prdm6)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117768446 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
117768446
NCBI-ProteinID:
XP_034452683
LinkDB
All DBs
Position
9:1094269..1150839
Genome browser
AA seq
644 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPPPQPDRLSIPMDGLRPSRLHSH
LLASTHCTSSSSSTSSSVASSSAAVAAAAAALTPSSSLSISASQGLSQLPVPQQIALFGQ
ALAPVCAGPGGPGGGGGGPGGPGGGGDLLVVVPPENQQGHNPAMGFLHQAKEQSCGGVGV
VSSSVKSSSGGGGGEEGGKGATSRFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDM
CADNRNGECPMHGPLHSLRRLVGTSSSAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYG
ICAAQRIPQGTWIGPFQGIPLLLDKLHGSMRNTRHLWEIYDTEGTLQHFIDGNDPSKSSW
MRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCTAQD
ENLNVPATVVEAMTRQESLQSFSKNGKPSSSSSSSTPSTSLMRSMVFPHSPCPRTFSLLD
KVGIGLQSDSSFSQLASKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMH
VCPQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTH
TGEKPFKCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacccgagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggcgcctctggctccgccgcct
cagcctgaccgcctctccatccccatggacggcctgcgcccgtcccgcctgcacagccac
ctcctggcctccacgcactgcacctcctcctcttcttctacgtcctcctcagtagcgtcc
tcttcagcagcagtagcagcagcagcagcagctctcaccccgtcctcctccctctccatc
tccgcctcccaagggctctcccagctgcccgtgccccagcagatcgctctctttgggcag
gcgttggccccggtgtgtgctgggcccggaggccccggaggaggaggaggtggaccagga
ggccctggaggaggaggagacctgctggtggttgtccccccggagaaccagcagggtcac
aacccagcgatggggttcctccatcaggccaaagagcagagctgtgggggggtgggggtg
gtgtcgtccagtgtgaagagcagcagcggaggaggcggcggcgaggagggcgggaaggga
gcaacgagcaggttcaaactgacgtcggaggagctggactactacctgtacggacaacag
aggatggagatcatcccactgagcaaccacacaggagaggtcaacaaccgctgcgacatg
tgtgcagacaacaggaacggcgagtgtccgatgcacgggcccctccactctctgcggcgc
ctcgtcggcaccagcagctcggcggctcccgtcaccctgccggacgtccctgattggctc
agagatctgcccagagaggtgtgtctgtgcacgagcacggttccaggtctgggttacggg
atctgtgcggctcagaggattcctcagggaacctggatcggtccgtttcaggggatcccg
ctgctgctggacaaactgcatggatccatgaggaacacacgacacctgtgggagatctac
gacacagagggaacgttgcagcactttatcgatggtaatgatcccagtaaatccagctgg
atgaggtacatccgctgtgcccgacactgtggggagcagaacatgatggtcgtccagtac
aggtcgtgtatcttctacagagcctgtatggacatcccccgaggaacagagctgctggtc
tggtacaacgactcctacacgtccttcttcggcatcccgctgcagtgcaccgctcaggac
gaaaacttaaacgtcccagcgacagtggtggaggccatgaccaggcaggagtccctccaa
tccttcagcaagaacggcaaaccctcctcttcgtcttcctcctccaccccctccacctcc
ctcatgcgttccatggtcttcccccactccccctgcccgaggaccttctccctgttggac
aaggtcgggatcggactccagtcggactccagtttcagccagttggcgtcaaagaaccag
cgagtcctggccagtccgacgtccaccagccagctgagcagcgagttcagcgactggcac
ctgtggaagtgtggccagtgcttcaagaccttcacccagaggatcctgctgcagatgcac
gtctgtccacagaatcccgacaggccgtaccagtgtggtcactgctctcagtccttctct
cagccgtcagagttgaggaaccatgttgtgactcactccagcgaccgaccctttaaatgt
ggatactgcggccgagcgttcgccggcgccacgacgctcaacaaccacatccgcacgcac
acgggagagaagccgttcaagtgcgagcggtgcgaccgcagcttcacgcaggccactcag
ctcagccgtcatcagcgtcttcccaacgagtgtaaaccggtgaacgagagcagcgagtcc
atcgaggtggattaa
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