Hippoglossus hippoglossus (Atlantic halibut): 117768880
Help
Entry
117768880 CDS
T07778
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117768880
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Protocadherins
117768880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_CELSR2_9th
Cadherin_C_2
Bact_surface_Ig-like
DUF5753
Motif
Other DBs
NCBI-GeneID:
117768880
NCBI-ProteinID:
XP_034453207
LinkDB
All DBs
Position
10:complement(15404717..15657947)
Genome browser
AA seq
989 aa
AA seq
DB search
MDSGQRKRSRGGRLWSICLYLAGLSCASPQLSYSVSEELSPGSVVGNIAKDLGLTAQRID
QRRLRVVSDSTTQYFEVKQATGDLVIKQSIDREQMCELSLTCTLHLQIVLDDPLEIHRVV
VVILDVNDNAPHFSTSNISLEISEAAAPGTKFRLESAHDPDVGTNSLRTYHLAANDFFTL
NVETKSDGSKFPELVVDKPLDRETQAKFRLMLTAVDGGQPEKSGSTLMLIKVLDVNDNAP
VFEESVNKVRLLENVAQGTLITKLNATDADSGNNGEISFLFSKYTPEGVLRLFSVDSKSG
EIRVKGHVDYEKATAYHITVQARDGGSPAMEGSCNVIVDIVDVNDNAPEVTVTSLTSPIR
EDSAPETVIALISARDLDSGVNGEVTLTVQQGLPFKLISAFGMHYSLITAGNLDRETVPE
YTVVIRATDAGSPRLSSQITFVVELSDVNDNAPTFSQKSYSVDIPESNAPSAPIAAVSAT
DPDLGDNARISYSILPSMVQGSSIASYVYINPDNGHIYSMRSLDHEQLNAFCIEVQARDA
GVPPRTANVTVHVFVVDVNDNAPVIVHPSYPKEKGLQLTVPPSAGPGHLINKLVGVDADS
GHNAWLFYSIAPGPNAGMFRIGPHTGELRTARKWAEEEEGSAYDILVIIQDNGEPPKSCS
VNITVTVDEKSTAVDAPASPRHTPFYHRTGMSDITLYLIISLACVSAVSFITFVALMIRC
LRHRSPGLGDSDCCCYDSHRSTRYHQRPSKDLHLQLNTDGPIRYMEVVGGSQDPNTRTYR
PCYSTLSSRSDFVFMKTPMLSHNNTLNMTLSRKHLMNSVNEQKPPNNDWRFTQGQRPGPS
GPHMPYGTHIRWTPNNGNRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATATL
GPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQQQQQATAQQAAQQALP
PPQASAQPEPPKAAQTPASKKKSTKKEKK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggattccgggcagaggaagcgctccagaggagggaggctgtggagcatttgcttgtat
ctcgctggcctctcctgtgcgtcccctcagctcagctattccgtatcggaggaactaagc
ccgggctccgtcgttgggaatatcgcaaaagatttgggtctgactgctcagcggatcgat
cagaggaggctgcgggtggtctcggattccacgactcagtacttcgaggtgaagcaggcg
accggcgatttggtcatcaaacaaagtatagacagggagcaaatgtgcgaactgagttta
acgtgtacgctccaccttcaaatagtccttgacgatccattagagatccatcgcgtggtg
gtggtcattctggatgtgaatgacaacgcgccgcacttttcgaccagcaacatttctttg
gagatatccgaggcggccgcgccgggcacaaagttccgcctggagagcgcgcacgacccg
gacgtggggaccaactcgttacgcacgtaccatctcgccgcaaatgacttttttactttg
aacgtggaaactaaaagcgacggcagtaagtttccagagctcgtggtggataaacctctg
gacagggagacgcaggccaagtttcgcctgatgctcacggctgtagatgggggacagccg
gagaaatctggctcaacacttatgctcattaaagttctggatgtaaatgacaatgcgccc
gtctttgaagaatcagtgaataaagttagactattagaaaatgttgcacagggcacttta
atcacaaagttgaacgcaactgacgcggattccggcaacaatggagaaatctcttttctt
tttagtaaatatacaccggagggggttctcagacttttcagtgtggattctaaaagcggg
gagatccgtgtgaagggccatgtggactatgagaaggccactgcgtaccacatcacagtg
caggccagagatgggggctctcctgctatggagggctcatgtaacgtcatagtggacatc
gttgatgtgaatgacaacgcaccagaggtcacagtgacgtcactcaccagtcctattaga
gaggactcagcaccagagacagtgatagcgctcataagtgcccgggacctggactcaggt
gtgaatggagaggttacattgactgtccaacaaggtttgccatttaaacttatttcagcc
tttggcatgcattacagcctcatcacagctggcaacctggaccgtgagactgtcccagag
tacacagtggtcatcagggccactgacgcgggttcaccgcgcctttcatcacagataacc
tttgtggtggagctctctgatgtgaatgacaatgctccaactttctctcagaagtcatac
tctgtggacatcccagagagcaacgctcccagtgcccccatcgcagctgtttcagccact
gacccagacctcggtgacaacgctcgcatatcgtactccatccttcccagcatggtccag
ggctcatccattgcttcttatgtctacattaacccagataacggtcacatctacagcatg
cgctctctggatcatgaacagctcaatgcattctgtattgaggtgcaggcccgggatgct
ggggtgcccccacggaccgccaatgtcactgtgcatgtgtttgtggtggatgtgaatgac
aatgcaccagtgattgtacacccctcctacccaaaagagaaaggattacagctcactgtg
cccccatctgcaggcccagggcacctcataaataaacttgtaggggtggatgcagacagt
gggcacaatgcatggctgttttactccatagccccgggaccaaatgctggaatgtttcgt
attgggccacacacaggtgagctccgcacagcccgcaaatgggccgaggaggaagagggc
tcagcctatgacattttggttatcattcaggacaatggtgaaccgcccaagtcttgttct
gtgaacattacagtaaccgtggatgagaagagcacagccgttgatgctccagcaagccct
cgccacacgcccttttaccaccgcacagggatgtcagacatcaccttgtaccttatcatc
tctctagcctgtgtatcagcagtctcctttatcacctttgttgccctcatgatacgctgc
ctaaggcaccggagcccgggcctgggagactccgactgctgctgctacgatagccacagg
tccacccgctaccatcagaggcccagcaaggacctgcacctgcagctcaacactgatgga
cctatacgctatatggaggttgtgggagggtcccaggatccaaacacacgcacttacagg
ccctgctactccaccctgtccagccggagtgactttgtatttatgaagacaccaatgctg
agtcacaacaacacactcaacatgacactcagcaggaagcaccttatgaactcagtcaat
gagcaaaaaccccccaacaatgactggcgcttcacccagggacagcgacctggacccagc
ggtccccacatgccatacggtacacacatacgatggacgccgaacaatgggaacagggca
actggaggacctgaggttgccatgggaactggtccctggccccagccccctactgaggct
gagcagctccaggccctgatggctgcagcgaacgaagtgagtgaggctacagccaccctg
gggcctggcaccatgggccttagcacccgctacagcccccagttcactctgcagcacgtc
cccgattaccgccagaacgtctacatccccggcagcaccgccaccctcacctccaacccc
cagcagcagcagcagcagcagcaggccaccgcccagcaggccgcccagcaggcgctccct
ccaccccaggcctcggcccagcccgagccccccaaggccgcccagacccctgcctccaag
aagaagtccaccaagaaggagaagaagtag
DBGET
integrated database retrieval system
