Hippoglossus hippoglossus (Atlantic halibut): 117768886
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Entry
117768886 CDS
T07778
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117768886
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Protocadherins
117768886
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117768886
NCBI-ProteinID:
XP_034453261
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All DBs
Position
10:complement(15427188..15434040)
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AA seq
823 aa
AA seq
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MTKTMGYRDWRWQALWWHHFFLLWSITDAQTRYSIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLRVASEADEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQIVIENPLSLHRIE
VEIKDINDNSPRFHTKEMSLKIAESAAVGSRFLLEGAEDSDVGSNSVKSYTLTKNECFTL
KMKEVEDGKTVPELVLEKLLDREKKAAHQLLLTALDGGNPVMTGTSQITVTVLDVNDNFP
VFDKNIYKVSLQENTVKDTFVVKMTATDADEGPNGEVEFSFGSRTPDSVLSVFEINSLTG
EIQLKGDLDYERTASYKIEIKAKDKGVPEMESQSRLQIDVIDVNDNTPEIVLTSEPQPVR
EDAPSGTVVALLKARDADSGNNAKVTLQLPKGSPFSLKPSFSNNYALVTSGALDRESFSE
YYIEITTTDSGSPPLSSKKTIPVSITDVNDNPPVFSQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKMTAVDAD
SGHNAWISYKVAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSST
VTVSILLEDGLHEPILDLRQKVTEPSKKTGRITLYLILSLASVSVLSVVTFLILAVKCIK
SSRSSGSCCMTQSDYDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTMIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSREQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaatgggataccgagactggagatggcaggcgctttggtggcatcacttc
tttctcttgtggagtataacagacgcacagactcgttacagcattccggaggaactaaaa
cagggctctgtggtaggaaatctagccaaagatcttggtttgggactgtctgagattttt
gatcgcaagctgcgagtcgcctctgaggctgatgagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacaggatagacagagaggctctatgtggacaaagcgcc
agctgtgttctacctctgcagatcgttattgagaaccctctgagtttacatcgcattgag
gtcgaaataaaggatataaacgataattcacccagatttcacacaaaagaaatgtctttg
aaaattgctgaatctgcagcagtgggatctcgttttcttctcgagggtgcagaggattca
gacgttggaagtaattcggtgaaatcctacacgttgactaaaaacgaatgctttacgttg
aaaatgaaggaggttgaagatggaaaaactgtccctgagttagtgttagagaagcttctt
gatcgagagaagaaagcagctcatcagctactactgactgcgttagacggagggaaccca
gtcatgactggtacctcacagatcactgtcacagtgcttgatgtaaatgataattttccg
gtttttgataaaaatatatacaaagtgtcgttgcaggagaacactgtaaaggatactttt
gttgtgaaaatgacagcaacggatgctgacgagggaccaaacggtgaagttgaattctct
tttggctcgcggacacctgattccgttttatcagtatttgaaataaattcattaacaggg
gaaatacagttgaaaggagacttagattatgaaagaacagcctcctacaaaattgaaata
aaggcgaaagacaagggagttcctgaaatggaaagtcaaagtcgtctccaaatcgatgtt
atagatgttaacgataacactccagaaattgttctcacctctgaaccacagccggtgcgc
gaagacgcaccaagtggcacagtggtggctttgctcaaagcgcgtgatgctgactctggc
aataacgctaaagtgacattgcaattacccaaaggttctcccttctctctaaaaccatca
ttttctaataattacgcactggttaccagtggtgctttagacagagagagtttttcagaa
tattatattgaaattacaaccactgactcaggctctcctcctctgtccagtaagaaaacg
ataccagtcagcatcactgatgtgaatgacaaccctcctgtattctctcagccctcctat
aatgtatatttaaaagagaatggggtaccaggatctatactgtactcagtatcagcctct
gacctggattttggtgaaaacgctaaaatctcttactctatactggactctaaagtgcag
gacgtttctgtctcatcgtatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacaccaccgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcaccagagg
atgccccgctccgctaaagcgggtcacctggtcactaagatgacggccgtggacgcggac
tcgggccataacgcctggatctcctacaaagtggcggaggccacagacgcctctctgttc
actgtcaatctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccggtccagtcctccacc
gtcacggtgtccatcctgctggaggacggtctccatgagcccatcttagacctccgacag
aaagtgaccgagcccagcaagaaaactgggagaatcaccttgtatttgattctctctctg
gcctcggtgtccgtgctgtctgtggtgacttttctcatcttagcggttaaatgcatcaag
agcagcagaagcagcggtagttgctgcatgacacagagtgactatgatggttacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacccataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtctccaatgtcc
gagtacagtgatttcactatgattaagcccagcagcaccactgactttaaggaggtgatc
agtgtcctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagc
agagaacaatag
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