Hippoglossus hippoglossus (Atlantic halibut): 117768891
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Entry
117768891 CDS
T07778
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117768891
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Protocadherins
117768891
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF4394
Aldolase_II
Borrelia_orfD
Motif
Other DBs
NCBI-GeneID:
117768891
NCBI-ProteinID:
XP_034453266
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All DBs
Position
10:complement(15434332..15437145)
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AA seq
821 aa
AA seq
DB search
MTKRIGYRDWRWQALWWHHFFLLWSITDAQTRYSIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLRVASEAGKQYFSVDAGKGELVVNDIIDREALCGQSASCVLPLQVVVENPLRSHRIE
VEIRDINDNSPRFLTQEINLKIPESVALGRRFSLESAEDPDVGSNSLKTYSLSKNDYFSL
KFKETKNGKAVPELVLEKTLDREKNALHHMLLTALDGGNPVTSGTCKIIITVLDNNDNFP
VFNENEYKVSLKENSTKGTLVIKLKATDADDGLNGEVKYSFGSRTPDFVLSTFEINDITG
EIVLKGLLDYETSKSYLIDVTAKDKGVPEMEGDCRVQLDVEDINDNAPDIVLTSKPVPVR
EDAPSGTVVALISARDLDSGNNGKVNLRLPKGSHFTLKPSFSNNYELVTSAALDRESFSE
YNIEITATDSGSPPLSSKKIIPVSITDVNDNPPVFSQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYAILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKMTAVDAD
SGHNAWISYKVAEATDTSLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSST
VTVSILLEDGLHEPILDLRQKVTEPSKKTGRITLYLILSLASVSVLSVVTFLILAVKCMR
SSRSSGSCCMTQSDFDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTMIKPSSTTDFKEVMSVLDASLPDSTWTFESQQVSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaataggataccgagactggagatggcaggcgctttggtggcatcacttc
tttctcttgtggagtataacagacgcacagactcgttacagcatcccggaggaactaaaa
cagggttctgtggtaggaaatctagccaaagatcttggtttgggactatctgagattttt
gatcgtaagctgcgagtcgcctctgaggctggtaagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacataatagacagagaggctttatgtggacaaagcgcc
agctgtgttctacctctgcaagtagttgttgaaaaccctttgcggtcgcatcgaattgaa
gtggaaatcagagacataaatgacaattctcctcgttttctaacgcaggagattaacctt
aaaataccagaatccgttgcgcttggcagacgtttttctctggagagcgcagaggaccct
gatgttgggagcaattctttgaaaacctactcgctaagcaaaaatgattatttttctctc
aaatttaaagaaacaaaaaatggaaaagcggtcccagaattagtgttagaaaaaacatta
gaccgggaaaagaatgctctccatcatatgctgttgacagcattagatggaggaaaccca
gtcacgtctggaacctgtaagatcatcattactgtacttgataataacgataatttccca
gtattcaacgaaaatgaatataaagtctcattaaaggagaacagcaccaaagggacactt
gtcatcaaactcaaagccacagatgctgacgatggtcttaatggtgaagttaaatattct
ttcgggtcccgaactccagactttgtgttatcaacatttgaaattaatgatataacaggt
gaaatcgtattaaaaggtttattagattatgagacttctaaatcttacctgatcgatgta
actgctaaagacaaaggcgtccctgaaatggagggtgactgtcgtgtgcagctggatgtg
gaggacataaatgataatgcgccagatattgtgttgacttcaaaacccgtgcctgttcgc
gaagacgcaccaagtggcacagtggtggctttgatcagtgcacgagaccttgactccggt
aataacggtaaagtgaatttgcgtttacccaaaggttctcatttcactctaaaaccctca
ttttctaataattatgaactggtaaccagtgctgctttagaccgagagagtttctcagaa
tataatattgaaattacagccactgactcaggctctcctcctctatccagtaagaaaatt
attcctgtcagcatcactgatgtgaatgacaaccctcctgtattctctcagccctcctat
aatgtatatttaaaagagaatggggttccagggtctatactgtactcagtatcagcctct
gacctggattttggtgaaaacgctaaaatctcttacgctatactggactctaaagtgcag
gacgtttctgtctcatcgtatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacaccaccgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcaccagagg
atgccccgctccgctaaagcgggtcacctggtcactaagatgacggccgtggacgcggac
tcgggccataacgcctggatctcctacaaagtggcggaggccacagacacctctctgttc
actgtcaatctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccggtccagtcctccacc
gtcacggtgtccatcctgctggaggacggtctccatgagcccatcttagacctccgacag
aaagtgaccgagcccagcaagaaaactgggagaatcaccctgtatttgattctctctctg
gcctcggtgtccgtgctgtctgtggtgacttttctcatcttagcggttaaatgcatgagg
agcagcagaagcagcggtagttgctgcatgacacagagcgactttgatggttacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacccataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtctccaatgtcc
gagtacagtgatttcactatgattaagcccagcagcaccactgactttaaggaggtgatg
agtgtcctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagc
agataa
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