Hippoglossus hippoglossus (Atlantic halibut): 117769074
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Entry
117769074 CDS
T07778
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04137
Mitophagy - animal
hhip04140
Autophagy - animal
hhip04217
Necroptosis
hhip04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117769074 (sqstm1)
04137 Mitophagy - animal
117769074 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
117769074 (sqstm1)
04218 Cellular senescence
117769074 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117769074 (sqstm1)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117769074 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117769074 (sqstm1)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Mitophagy
Cargo receptors
117769074 (sqstm1)
Pexophagy
117769074 (sqstm1)
Aggrephagy
117769074 (sqstm1)
Xenophagy
117769074 (sqstm1)
ER-phagy
ER-phagy recepters
117769074 (sqstm1)
Other autophagy associated proteins
Midbophagy
117769074 (sqstm1)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117769074 (sqstm1)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117769074 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Secretin_N_2
Presenilin
Motif
Other DBs
NCBI-GeneID:
117769074
NCBI-ProteinID:
XP_034453558
LinkDB
All DBs
Position
10:complement(27666666..27670355)
Genome browser
AA seq
416 aa
AA seq
DB search
MSVVTVKIYLLGKDEAVKEIRRFTMNQDVSFEQLNQKTASVFTNLKNFNMFYRDEDGDLV
AFSSDDELTMGLSCMKDNTFRLFIKEKKEHRRDFPLHAFPPFTFAPPPSHHAPPLHLAPP
PALHPNVTCDGCEGPVVGTRFKCSVCPNYDLCSTCQAKGTHTEHALLPIWHPLQQWFPRG
MFNKLHNMKRIRCMWNQTQIQGQTHNQGQNQDQTHNQDQTHNQDQTQDQTQDQTQEQASD
CASQASVDFLKNIGEGVAAMLSPLGIDVDIDVEHEGQRSKVNTCQSSGGWGDVEMDGVGS
EGSKIGRESDEEWTHLSPREVDPSTGELQSLQPGEQDQDPFSGGKQGPTGLREAALYPHL
PEEADPRLIESLSLMLTMGFNDEGGWLTRLLQAKNFDIGAALDAIQYAKKPRPPQP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtcacggtgaagatttacctgctcggtaaagacgaggcggtgaaagaaatc
cgcaggttcacgatgaatcaggacgtttccttcgagcaactgaaccagaaaactgcgtca
gttttcaccaacctgaagaacttcaatatgttctacagagatgaagatggagacctggtg
gcgttttcctctgatgatgaactgacgatgggtttgtcgtgtatgaaggacaacaccttc
cgcctcttcatcaaagagaaaaaggagcaccgtcgagactttcctctccacgccttcccc
cccttcacctttgccccccctccttcccaccatgcccctccccttcacctggccccgccc
cccgccctgcaccctaatgtcacctgtgacggctgtgaaggtcccgtggtgggaactcgt
ttcaagtgttcggtttgtccaaactacgacctttgttccacctgccaggccaaagggact
cacaccgagcacgctctgctgcccatctggcacccgctgcagcagtggtttcctcggggg
atgtttaataaacttcataacatgaagaggattagatgcatgtggaaccagacccagatc
cagggtcagacccataaccagggtcagaaccaggaccagacccataaccaggaccagacc
cataaccaggaccagacccaggaccagacccaggaccagacccaggaacaggcttctgac
tgtgcttctcaggccagcgtggacttcctgaagaacattggggaaggagtggcggccatg
ttgagcccgctgggtattgacgtggacatcgatgtggagcacgagggtcagaggtcgaag
gtgaacacttgtcagagttcaggtgggtggggtgacgtggagatggacggagtcggcagt
gaggggtcaaagattggcagagaatctgatgaggagtggactcacctcagccccagagag
gttgacccctccactggagaacttcagtccctgcagcctggggaacaggaccaggacccc
ttttcaggaggaaagcaggggccaacaggtttgagggaggcagctctatatcctcacctg
cctgaagaggcggacccccgtctgatcgagtctctgtccctcatgttgaccatgggcttc
aatgatgagggggggtggttgactcgactccttcaggccaaaaacttcgacattggagcc
gcgctcgacgccatccagtatgccaagaagccccgcccacctcagccgtga
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