Hippoglossus hippoglossus (Atlantic halibut): 117769118
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Entry
117769118 CDS
T07778
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
hhip04510
Focal adhesion
hhip04540
Gap junction
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117769118 (pdgfrb)
04020 Calcium signaling pathway
117769118 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117769118 (pdgfrb)
04540 Gap junction
117769118 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117769118 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hhip01001
]
117769118 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hhip04090
]
117769118 (pdgfrb)
Enzymes [BR:
hhip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117769118 (pdgfrb)
Protein kinases [BR:
hhip01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117769118 (pdgfrb)
CD molecules [BR:
hhip04090
]
Proteins
117769118 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Adeno_E3_CR1
C2-set_2
AMP-binding_C_2
VEGFR-1-like_Ig-like
Haspin_kinase
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
117769118
NCBI-ProteinID:
XP_034453642
LinkDB
All DBs
Position
10:16527594..16555501
Genome browser
AA seq
1105 aa
AA seq
DB search
MTRATASILHLTVTTLLCLCAQLHCLEITPNDKELVLAEGSSLTLTCSGFRETTWEFKRD
DVPYFQVEQVQNVGQSYQIVQSGATSSVLTLQNVSWKHTGVYLCVDQHTGETKEAVVFVP
DPDVWFIERFHGMVTKTSEESSIPCVVTNPNINVTLYERDTDMPIRGHYVPSEGYKAPLE
DRTYVCRGELNGDVKESQAFYVFSISVPEAINAYINASKTVLKQGEPLTVNCTVHGVELV
YFSWDIPNRELIEVEPLTDVLSATNMRSCLIFSRATVAHSGNYVCHVHEGMQDQSDSASV
NITVLERGFVDVKAAEQQNISAKLQENVELRVEIEAYPPPQVRWSKDGATINGDKTITTR
PEQEIRYITILTLVRVRTEQKGLYTVLVTNGDDTKEVTFDLEVRVPSQIKELTDLHLPGK
RHLVTCVAEGVPTPTIEWYSCDSMLKCSNQTAVWQLLTPEPEELSIQTNVGYIKTRKTSQ
VRSQVTFHKPQQVTVRCETSNQAGLVDRRDIKLVSGTPLFSQVTVLAAVFALLVIIIMAF
IILVAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMSRDNLVLGRTLGSG
AFGRVVEATAYGLAHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLG
ACTKNGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDDGCLISGGSTPLSQRKGYV
SSGSESDGGYMDMSKDEPSIYMPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGDSRLDL
AISDASILTYDDLLSFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD
IMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMN
ELFYSALKRGYRMTKPAHASDEVYDIMRKCWDEKFETRPEFSFLVHSMGNMLADGYKKRY
NQVNDNFMKSDHPAVARTKPRLSSPFPIANPSFGSPASPATLSFPPDPYNQNLSPGNFRQ
EADTQDVITSYNEYIIPIPDPKPEEAFTDVPSESPASSEALEEESDSVSQDTADTLPEED
RLEETSERDALLGSSGTPEVEDSFL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgacgagggcgacggcgtccattctccatctgacagttacaactctcctgtgcctctgc
gcgcagctgcattgcctggagataacacccaacgacaaagagctagtcctggccgagggc
tcctccctcacccttacctgctccggcttcagggagacgacttgggagttcaagagggac
gatgtgccgtatttccaagtggagcaagttcaaaatgtaggccaaagctatcaaatcgtg
caaagcggcgccacatctagcgttttgaccctgcagaacgtgagctggaagcacacgggg
gtgtacctgtgcgttgatcaacacactggagaaactaaggaggctgtcgtgttcgtccca
gaccctgatgtgtggttcatagagagattccatggcatggtaactaagaccagtgaggag
agcagcatcccctgcgtggtcaccaacccaaacatcaacgtcaccctgtatgagagggac
actgacatgcccatcagaggacattatgttcccagcgaggggtacaaggcgccgctggag
gacaggacctacgtgtgtcgaggagagctgaacggggacgtgaaggagtctcaggccttc
tacgtcttcagcatctctgtccccgaggccatcaacgcctacatcaatgcatcaaagacg
gtcctgaaacaaggcgaaccgctgacagtcaactgcacggtgcacggagtggagctggtg
tatttctcctgggatatccccaacagagagctgattgaggtggagccgctcacagacgtc
ctgtcggccaccaacatgcgctcctgcctcatcttctctcgagccacggtggcccacagc
ggaaactacgtctgccatgtccacgagggcatgcaagaccagagtgactctgccagcgtc
aacatcactgtgctcgagcgaggcttcgtggacgtgaaggctgccgagcaacaaaacatt
tcagccaagttgcaggagaacgtggagctgagagttgagattgaggcctaccctccccct
caggtccgctggagcaaagacggtgccaccatcaacggagacaaaaccatcacaaccaga
ccagagcaggagatcaggtacatcactattctcaccttggtgagggtgaggacggagcag
aagggactctacaccgtcctcgtcaccaacggggacgacacaaaggaagtgacctttgac
ctggaggttcgagttccctctcagattaaagagctgaccgacctccacctcccagggaag
agacatttggtgacctgtgtagctgagggggtcccaaccccgaccatcgagtggtacagc
tgtgacagtatgctcaagtgtagcaaccagacagcggtttggcagctgctgacgccagag
ccggaggaactgagcatccaaaccaacgtgggctacatcaagactcggaaaaccagtcag
gtccgcagccaggtgaccttccacaagccccagcaggtcactgtccgctgtgagaccagc
aaccaagcaggcctcgtcgacaggagggacatcaaactggtgtccggcacaccgctgttc
tcccaggtgacagtgttggctgctgttttcgccctgctggtcatcatcatcatggccttc
atcatcctcgtcgccgtgtggaggaagaaacctcgttacgagatcaggtggaaggtgatc
gagtctgtgagccaggacggtcatgagtacatctacgtggaccccatccacctgccctac
gacctggcctgggaaatgtctcgagacaacctggtgctgggtcgcactcttggatcagga
gcctttggcagggtggtcgaggcaactgcgtacggtctcgctcattcccagtccagcaca
aaggtggcagtgaaaatgctgaagtccacagccaggaggagtgagacccaggccctgatg
tccgagctgaagatcatgagtcacctgggacctcacctcaacattgtgaacctgctagga
gcttgcactaaaaatgggcctctgtacctggtgaccgagtactgtcgctatggcgacctg
gtggactaccttcacaggaacaagcacacgttcttgcagtactacgctgaaaagaaccaa
gatgacggctgcctcatctcgggaggaagcacaccgcttagccagaggaaaggctatgtg
tcttccggaagtgagagcgatggaggctacatggacatgagtaaagatgagccctcgatc
tacatgcccatgcaggagcagatagataccatcaagtacgcagacatccagccttctcca
tacgagtctccctaccagcaagacatttaccaggaacaaggtgacagcagattggacctg
gccatcagtgacgcttccatcctcacctacgacgatcttttgagcttcagctaccaagtg
gcgaaggggatggagttcctcgcctccaagaattgtgtccatcgtgacctcgccgccagg
aacgtcttgatctgtgagggcaaactggtgaagatctgtgacttcggcctggccagagac
atcatgcatgactccaactacatctctaaaggcagcaccttcctgcccctgaagtggatg
gcaccagaaagtattttccataatttgtacacaaccctgagcgatgtgtggtcatatggc
atacttctttgggagatcttcacactgggaggaaccccctaccctgatctgcccatgaat
gagttattctacagcgctctgaagagaggctaccgaatgaccaaacccgcccacgcctct
gatgaagtctatgatataatgaggaagtgctgggatgagaagtttgagacgaggcctgag
ttctcctttctggtgcacagtatggggaatatgctggcggacggctataaaaagagatac
aaccaagtcaacgacaacttcatgaagagcgaccacccggctgtcgcccgcaccaagccc
cggctctcctcaccctttcccatcgccaatccatcatttggctcccccgcttcccccgcc
accctctccttccccccggacccctacaaccagaacctgagcccgggaaactttagacag
gaggccgacacgcaggacgtcataacctcatacaacgagtacatcattccaatcccagac
ccgaagccggaggaagctttcactgacgttccatcggagagccctgccagctctgaggct
ctggaggaggagagcgactccgtgtctcaggacacggcggacaccctgccagaggaggac
cggctggaggagaccagcgagagagacgctctgctgggctcatccgggacgcctgaggta
gaggacagcttcctgtag
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