Hippoglossus hippoglossus (Atlantic halibut): 117772384
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Entry
117772384 CDS
T07778
Symbol
tgfb1a
Name
(RefSeq) transforming growth factor, beta 1a isoform X1
KO
K13375
transforming growth factor beta-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04060
Cytokine-cytokine receptor interaction
hhip04068
FoxO signaling pathway
hhip04110
Cell cycle
hhip04148
Efferocytosis
hhip04218
Cellular senescence
hhip04350
TGF-beta signaling pathway
hhip04518
Integrin signaling
hhip04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117772384 (tgfb1a)
04350 TGF-beta signaling pathway
117772384 (tgfb1a)
04068 FoxO signaling pathway
117772384 (tgfb1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117772384 (tgfb1a)
04518 Integrin signaling
117772384 (tgfb1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117772384 (tgfb1a)
09143 Cell growth and death
04110 Cell cycle
117772384 (tgfb1a)
04218 Cellular senescence
117772384 (tgfb1a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117772384 (tgfb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hhip03110
]
117772384 (tgfb1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hhip04052
]
117772384 (tgfb1a)
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117772384 (tgfb1a)
Chaperones and folding catalysts [BR:
hhip03110
]
Intramolecular chaperones
Others
117772384 (tgfb1a)
Cytokines and neuropeptides [BR:
hhip04052
]
Cytokines
Transforming growth factors (RSTK binding)
117772384 (tgfb1a)
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117772384 (tgfb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
117772384
NCBI-ProteinID:
XP_034459374
LinkDB
All DBs
Position
13:complement(3200581..3209951)
Genome browser
AA seq
389 aa
AA seq
DB search
MKLALLTLMVVYAVGHVSGMSTCKTVDLEMVKKKRIEAIRSQILSKLRLPKEPEPDQAGD
DEEIPSPLISLYNSTKEMLKEQQTDVQTDISTEQEEEEYFAKVLHKFNMTTEKNDTYDKT
AKSIPMYFNISDIRQSVGDYRLLTSAELRMFIQQTTIAENQRVELYHGLGTSAQYLASRF
ITNLSKDKWLSFDVTETLQSWLKGTEDEQSFQFRLFCGCTENEPNMETSFSFSISGMVTK
RGDIATLGEKNQQSPYILTMSIPQNTSTTHLGSRKKRSTDGKDTCTAQTETCCVRSLYID
FRKDLGWKWIHKPTGYHANYCMGSCTYIWNAENKYSQILALYKHHNPGASAQPCCVPEAL
EPLPILYYVGRQHKVEQLSNMIVKSCKCS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcactgttgacgctcatggtcgtatacgcggtgggccatgtaagtggcatg
tccacgtgtaagacggtggatctggagatggtgaagaaaaagcgcattgaggctatcagg
agccagatcctcagcaaattgcgtttgccaaaagagcccgagcctgatcaagccggagac
gacgaggagatcccctcccctctgatctcgctctacaacagcaccaaggagatgctgaag
gagcagcagaccgacgtccagacagacatctccacggagcaggaggaggaggagtacttt
gccaaggtgctgcacaagttcaacatgaccacagaaaaaaacgacacttatgacaagacg
gccaaaagcatcccgatgtacttcaacatctctgacatacgacaaagcgtcggggattac
cgcctgttgacgagcgccgagctgcggatgttcatccagcaaaccacgatagccgagaac
cagcgggtggagctgtaccatggtctgggcacgtcagcccagtatcttgcttcccgcttc
atcacgaacctgtcgaaggacaagtggttatcgttcgacgtcaccgagaccctgcagagc
tggctcaaaggaacagaggacgagcagagtttccagttcaggctcttctgtggatgcacc
gagaacgagccgaacatggagaccagtttcagtttttccatctctggcatggtgaccaag
agaggagacatagctacattaggagagaagaatcagcaatcgccctacatcctcaccatg
tccatccctcagaacaccagcaccacccacctcggctcacgcaaaaaacgctccacagac
gggaaggacacgtgtacagcccagacggagacctgctgcgtgcggagcttgtacattgac
ttcaggaaagatctgggctggaagtggatacataagccgacgggctaccacgccaactac
tgcatgggatcctgcacctacatctggaatgctgaaaacaaatattctcagattttggcc
ttgtacaagcatcacaacccgggagcctctgcccagccctgctgcgttcccgaggcgctg
gagccactgccaatcctctactacgtgggcaggcaacacaaggtggagcagctgtccaac
atgatcgtgaagtcctgcaagtgtagctaa
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