Hippoglossus hippoglossus (Atlantic halibut): 117772420
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Entry
117772420 CDS
T07778
Symbol
tiam1b
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04530
Tight junction
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117772420 (tiam1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117772420 (tiam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117772420
NCBI-ProteinID:
XP_034459423
LinkDB
All DBs
Position
13:complement(5494081..5540185)
Genome browser
AA seq
1590 aa
AA seq
DB search
MGNVESQHGDHGLYGNERGYLSRKHMSRSLRISNKQSRRSRHASSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNVLPDFGSPIWVDRVAMNLRPVSFHNDQANPSVHMNTMHI
TLPGATAEEVHDEDVYTGEVTYLQKTRDGTKETIIFKKKRSKSADMWRDDSLEFSLSDLS
QEQLTSTEEIIDATNERDFPDCEGHLQSSPTDSTDRANSLDELYSQKSPARRQPHGRYAK
WHDANRVIREGEDDKMLSPSEEDGNSYGAYTLPCRRSHCLSEGLSSHQAAICASMQGRRA
KTIQDVTAGEGSEYEDSGIDGVTVEPEHQSRRYKTMSASFSVCSAHGRGMFAGSDSGSSS
GGGASECVQGVYENFRQELEMSSCQTESLEEAGSALSDEQSTMSSAYQSDVLLSVAQGMV
RKAGRLSVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYETDGGSGIDNNSIPKHA
IWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACATAVARQH
HRDDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILEQIFLWEQNLEQF
HMDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTETGV
RRRAQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPTINQVFADGEEPVKPVDGIYVDPA
KEHRRSEAGTVKSLPRPSTESDIWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVLETIC
KAHQLDATKHYLRLKFLIENKVQFYIPKPEEDVCDLLYKEIELCSKITKVIQFDRDESCM
IGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKASHSLNFSDMKAAF
SQASLALTVNTLPSVERRQLCYVPPRRSDEEEDLYTDIFSQSQEDILDVGVGLLLESSGD
SLDDDSEIFRDFECSKSTEQVAAFCRSLHDMNPSECVSSSPSPESPFPPPATLRQLSDAD
KLRKVICELVETERAYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLPEMVEFQVEFL
KTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKA
KTDHDFKAFLEERNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYHLDV
AMKAMNKVASHINEMQKIHEEFGAVFDHLITEQSGEKKEVADLSMGDLLLHTSVTWLNPP
ASSGKWKKEPQIATFVFKTAVVFVCKDGSKQKKKMGGSHRASISSDDKDPFRFRHMIPTD
ALQVRSLANTDGEGSAVCEIVHTKSESEGRPERTFQLCCSSPESRKDFLKTVHSILREKH
RRQLLKTESLPLNQQYVPFGGKRLCALKGARPVINRAASAPTRTLGRRKLVRNRFTIDTD
IVFDGEPEQDLASPEEPVSARLQQEDKPEQQQTEVAGDTDRWVEEQFDLEEYEDQEEVKE
TDILSDDDEFCQTPGAPSAEADLEAPVMALSLEGGEGGEAEECKGLKSPTVSETHDPELV
DAEKQDLKQTKRGEIWVRRDPSASSPDCDM
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgtcgagagtcagcatggggaccacggcctctacggtaacgagcgtggctat
ttgtcacggaagcacatgtctcggtctctccgcatctccaacaagcagtccaggcgctct
cgacatgcttcatctgggaagatagagcacaggaactctgagacgagcacgcgctcgagc
agcactcccagcatcccacaatccctggctgacaatggcctggaacccttcaacgagaca
aatgtcctgccagacttcggaagccccatttgggtggatcgtgtggccatgaatctgcga
cccgtgtccttccacaatgaccaggccaatccctccgtgcacatgaacacgatgcacata
accctgcccggggccactgcggaggaggtgcatgacgaagatgtgtacacgggcgaagtg
acgtacctccagaagacccgggacgggaccaaggagaccatcatcttcaagaagaagagg
tcgaagtccgctgacatgtggcgagatgacagcctggagttctccctgtcagacctcagc
caggagcagctgaccagcacagaggaaatcatcgacgcgaccaatgagagagactttccc
gactgtgaaggccacctgcagtccagccccacggactccaccgacagagccaactccctg
gacgagctgtacagccagaagagccctgcccgcaggcaaccccacggccgctatgccaag
tggcacgacgccaaccgggttatcagggaaggagaggatgataagatgctctcgccgtcc
gaggaggatggcaacagttacggcgcgtacacccttccctgccggcgctcccactgcctg
tccgaaggcctgagcagccaccaggccgccatttgtgccagcatgcagggcaggagggcg
aagaccatacaggatgtcacagccggggagggcagcgagtacgaggatagcgggatcgac
ggggtgaccgtggagccggagcaccagtccagacgctacaagaccatgtcggcctccttc
tccgtgtgctcggcccacggcaggggcatgttcgctggcagtgacagtggcagcagcagc
ggcggcggggccagtgagtgcgtgcagggcgtgtacgagaactttcgccaggagctggag
atgagctcctgccagacggagagcctggaggaggcaggctccgccctaagtgacgagcag
agcaccatgagctccgcctaccagtccgacgtgctgctcagtgtcgcccaggggatggtg
aggaaggctggcaggctctccgtcaagaacttcctcgtgcataagaagaacaagaaagtg
gagtcggccacaaggcgcaagtggaagagttactgggtttccctgaaaggttgcacgctg
ttcttctacgaaactgacggcgggtcaggcatcgacaacaacagtatccccaagcacgcc
atctgggtggagaacagcatcgtccaggccgtgccagagcatcccaaaaaggactttgtg
ttctgtctcagcaactccctgggagatgcttttctgttccagacctgcagccagacggag
ctggagaactggatcaccgccatccactcggcttgtgccaccgccgtcgcccggcagcac
cacagggacgacacggtgcggctccttcgcgccgagatcaagaagctggagcaaaagatc
gacatggacgagaagatgaagaagatgggggacatgcagctgtcggctgtcactgacacc
aagaagagaaagacgatcctggagcagatcttcctttgggagcagaacctggagcagttt
cacatggatctattccgcttcaggtgctacctggccagcctgcagggaggagagctgccc
aaccccaaacgcctcctggcctttgcctctcgccccaccaagctggcaatgggccgactg
ggaatattctctgtctcctccttccatgcactggtggcagcacgcacagagaccggagtg
aggcggcgagcgcaggccatgtctcgatcctgcagcaaacgcaagagcaggttctcctcg
ctctggggtctggacacgacctcaaagaagaagacaaaagcccatcccaccatcaaccag
gtctttgctgatggagaggagcccgtgaaacctgtagatggtatatatgtggatcctgca
aaggaacacagaagaagtgaggcgggcactgtgaagagcctcccacggcccagcacggag
agcgacatctgggtgcccgaccacctcaccccctcctgggtgtgtctgccaaacgaccag
cctgtgctcaccatcatccaaccgggggaatctgcactgtgtgtcctggaaaccatctgc
aaggctcaccagctcgatgccaccaagcattacctgagactcaagttcctcatcgaaaac
aaagtgcaattctacattcccaaaccagaggaggacgtgtgcgacttgctttacaaagaa
attgagctgtgctccaagataacaaaagtaatccagtttgacagagacgagtcctgcatg
atcggctacggtttctccatttcagtggtggaggaggacggcgtgcagcagctctacatc
accgacgtgaaggcgggcggattagcctttgccaaaggtctgaacgcgggggatgaaata
cttcagctgaacggaaaggcctcccacagcctgaacttctccgacatgaaggccgcgttc
tctcaggcgtcgctggcgctgacggtcaacacgctgccctccgtggagcgccggcagctg
tgctacgtgccgccgcgccgctccgacgaggaggaggatctctacactgacatcttctcc
cagagtcaagaggacatcctggacgtgggggtgggtctgctgctggagagctcaggagac
agcctggacgacgactccgagatcttcagggacttcgagtgcagcaagagcacggagcag
gtcgccgctttctgccgcagtctccatgacatgaatccctcggagtgcgtgtcctcctcg
cccagcccggagtcgcccttcccgcctcccgcaactctccggcagctctccgatgccgac
aagctccgcaaagtcatctgcgagctcgtggagaccgagcgggcctacgtcaaagatctc
aattgcctcatcgggagatatttaaccccactgcagaaggagaccttcctcactcaggat
gagttggatgtgctgtttgggaatttgcccgaaatggtggagtttcaagtcgagtttctc
aagaccctggaagacgggaccagattggttccagatctggagaagctggagcgagtggat
cagtttaagaaaatcctcttctccctgggaggctcgttcctgtactatgcagaccgtttc
aaaatctacagtgctttctgcgccagccacaccaaagtcccgaaggtcctcgtaaaggcc
aaaaccgaccacgatttcaaggccttcctggaggagcgcaaccccaagcagcagcactca
tccaccctggagtcgtatctgatcaaacccatccagagggtcctgaagtatccgctgctg
ctgaaggagctgtactcgctcacggacccagacagcgaggagcactaccacctggacgtt
gccatgaaagccatgaacaaagtggccagccacatcaacgagatgcagaagatccacgag
gagttcggagcggtgttcgatcacctcatcaccgaacaaagcggcgaaaagaaagaggtt
gctgatttgtcgatgggggacctgttactccacaccagcgtcacctggctcaacccgccg
gcctcctcagggaaatggaagaaagagccccagatagcaacatttgtgttcaaaacggcg
gttgtcttcgtatgcaaggacgggtccaagcagaaaaagaaaatgggtggctcccatcga
gcctccatatcttcagatgataaagaccctttccgattccgtcacatgatccccactgac
gcccttcaagttcgatccttggccaacacagacggcgaaggctctgccgtgtgtgagatc
gtccacacgaagtcggagtccgaggggcggccggagaggacgtttcagctgtgctgcagc
tccccagagagtagaaaagatttcctgaaaaccgtccattccatcttgagggaaaagcac
cgccggcagctcctgaagacggagagtttacccctcaaccagcagtacgtgccctttgga
gggaagcgtctctgtgccctgaagggagcacgtcccgtcataaacagagcagcatctgcc
cccaccaggactctgggcaggaggaagctcgtgcgcaaccgcttcaccatcgacacggac
atcgtatttgacggtgaacccgagcaagacctcgcctctccagaggagcccgtctccgcc
cgtctgcagcaggaggacaaacctgagcagcagcagaccgaggtagcgggcgacacagac
cgctgggtggaggagcagttcgacctcgaggaatacgaggaccaggaggaggtgaaggag
acggacatcttgagtgacgacgatgagttctgtcagacgcctggggcgccgtccgccgag
gccgacctggaggcccccgtcatggctttgtccttggagggtggggagggtggggaggcg
gaggagtgcaaaggcctcaagtccccaacagtaagcgaaacgcatgatcctgagctggtc
gacgcagagaagcaggatctgaagcaaacgaagaggggtgagatctgggtaagaagggat
ccatccgcttcatccccagactgcgacatgtga
DBGET
integrated database retrieval system
