Hippoglossus hippoglossus (Atlantic halibut): 117773014
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Entry
117773014 CDS
T07778
Symbol
trim63a
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63a
KO
K10655
tripartite motif-containing protein 63 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117773014 (trim63a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117773014 (trim63a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117773014 (trim63a)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117773014 (trim63a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-B_box
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-RING_6
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
117773014
NCBI-ProteinID:
XP_034460576
LinkDB
All DBs
Position
2:complement(11239567..11240970)
Genome browser
AA seq
353 aa
AA seq
DB search
MGSRQRQTKINHREKKKQTMDIQTSQVMRSLSAMESLEKQLSCPICLDMFNKPVVILPCQ
HNLCRSCANDLYESRNPYHFSGGTFRCPTCRFEVMLDRHGVYGLQRNLLVENIIDIYKQQ
QESRSGNGEDPPLKDKDTKEPMCKEHEEERINIYCITCQTPTCSMCKVFGQHKDCEVSPL
HAIYQSQKSELCAAVELLAAGNSCVQAVVAQMDDTCKLIQDNGELQRRRLGESFDLLYAI
MEERKGQLLEHISREEQDKMSALRALAERYKQQLQLSNQLQEKLQQSVQSSGAAEFLLTA
KQLQEEAHKAASGVDLQRVEAGYESMEHLRLNTEEVETLLAHMDFRQDCEDEE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaggcagcggcagacgaaaattaaccacagagagaagaagaagcagacgatg
gacatccagacgagtcaggtgatgcgttcgctcagtgccatggagagtctggagaagcag
ctgagttgtccaatctgtctcgacatgttcaacaaacccgtggtcatcctgccctgtcaa
cacaacctctgtcgcagttgcgccaacgacctctacgagtcccgcaacccctaccacttc
tctggtggcaccttccgctgccccacctgtcgcttcgaggtaatgcttgaccgccacggt
gtgtacgggctgcagaggaacctgctggtggagaacatcatcgacatctacaagcagcag
caggagagccgcagtggaaatggcgaggacccgcccctgaaggacaaagacaccaaggag
cccatgtgtaaggagcacgaggaagaacgcatcaacatctattgcatcacatgccagacg
ccgacctgctccatgtgcaaggtgttcgggcaacacaaagactgcgaggtgtcgccgctg
catgccatctaccagagccaaaagagcgagctgtgtgccgctgtggagctgctggctgca
ggaaacagctgcgtccaggccgtcgtggcgcagatggacgacacctgcaagctgattcag
gacaatggcgagctgcagaggagacgcctgggcgagagctttgacctgttgtacgccatc
atggaggagaggaagggtcagctgctggagcacatcagccgcgaggagcaggacaagatg
tctgcgctccgagcactcgccgagcgctacaagcagcagctgcagctcagcaaccagctg
caggagaagctgcagcagagcgtgcagagcagcggcgctgcagagttcctcctcaccgcc
aagcagctgcaggaggaggcgcataaggcggcgagcggcgttgacctgcaaagagtcgaa
gcaggctatgagagcatggaacacctgaggctcaacacggaggaggtggagacgctgctc
gctcacatggacttcagacaggactgcgaggacgaagagtaa
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