Hippoglossus hippoglossus (Atlantic halibut): 117773981
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Entry
117773981 CDS
T07778
Name
(RefSeq) spectrin family protein isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117773981
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117773981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117773981
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117773981
Intermediate filaments
Intermediate filament-binding proteins
117773981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
117773981
NCBI-ProteinID:
XP_034461840
LinkDB
All DBs
Position
14:14272091..14320327
Genome browser
AA seq
2379 aa
AA seq
DB search
MSTISPTDFDSLEIQQQYNDINNRWDLAAETDWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNIHNFTTSWRDGLAFNAIVHKHRSDLIEFDNLKRSNAHYNLQNA
FNVAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDYA
IEADQLIEKYESLASELLQWIEQTIGTLNDRQLANSLNAVQNQLQAFNSYRTVEKPPKFT
EKGNLEILLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGTDLGAVEAATRKHEAIETDIGAYWER
VAAVEAVAKELEAEGYHDVRRVIARRDNVLRLWEYLKELLVARRERLNAHRDLQRLFQEM
RYIMDWMADMKSRLQSQDSGKHLHDVLDLLQKHTLVEADISAQAERIKAVQGAAQRFTSY
EQAYKPCEPGLVSEKVDLLGQAYEELGQLACKRTERLEDSRRLWQFMWDVGEEAAWIREQ
EQILASGDCGRDLTSALHLLSKHEAFRDEMAARYGPLSNSIAAGEALVNEGHFGAPEVTE
RIEDIRSQWAHLEETTKLREQRLKEAVALHQFQTDASDMEAWILETLRQVSSQELGHDEF
STQTIARKQREIDEEIQSHRPVIDSLQEQVQALPQAYIQSPQVDGRLPAIEQRYEELETL
SVARRQALEGALALYRMFSEAGACQLWVEEKEQWLDSMEIPTKLEDLEVVQQRFETLEPE
MNNLGTRVTDVNQVAEQLLSSDNCSKDQIHQTQDQLNNRWTEFEQLAGQKKHALESALNI
QNYHLECNEIQSWMKEKTKVIESTQSLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLRN
EAEKLAMEHPDQAGEIQGRLAGIQEVWEELNATMKRREESLGEASKLQGFLRDLDDFQSW
LSRTQTAVASEDIPTSLPEAESLLAQHENIKNEVDNYKEDYEKMRAVGEEVTQGQTDAQY
MFLAQRLQALDTGWHELRRMWENRHSLLAQAFDFQTFLRDAKQAEAFLNSQEYVLSHTEM
PSSLQGAEEAIKKHEDFLTTAEASEEKITGVVENGRRLMNDSNANSDKIQEKVDSVQERH
FKNKEAANELLTKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGQALVAEKPELKPVVQQTLEDLQRQWEELEGTTRTKAQCLF
DANRAELFTQSCSALDVWLKNLEGQLHNDEYGKDLTSVNILLKKHQMVEHQMEVREKEVQ
SLQSQALALSQEDAGLAEVDGQQRRVTDNFSNLQEPLKLRRQRLLASKEAHQFNRDLEDE
ILWVKERMPLATSTDHGKDLPTVQLLIKKNQTLHKEIQGHQPRIDDIHRRGKTQSQVDGE
RQSVLEERLVELKDLWDQLIGETDKRRARLIEANRAQQFYADAAEAEAWMGEQELHMMSE
EKAKDEQSALVMVKKHQIVEQALEDYAQTIHQLANSSRLMVTSEHPESERITLRQAQVDK
LYAGLKDLAEERRGRLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEHVTMLRD
KFREFARDTSTIGQERVDGVNGLADDLIESGHPENASVAEWKDGLNEAWADLLELIDTRT
QMLAASYELHRFHQDAMEVLGRVKEKHEALPSDLGRDLNTVQHLHRQHNTFEHDIQALSG
QVNQVQEDAARLQKAYAGEKADEIHRSENAVTSAWEGLLETGQARRLLLLDTVEKFRFFN
MVRDLMLWMDGVNLQIDAHDSPRDVSSAGLVIANHQDIKSEIETRADSFTACTEMGNTLI
NNNHYAADEIREKLVQLQEKRDRINKNWLDKMDHLQIVLEVLQFGRDACVAESWLAGQEP
LVRAAELGTNVDEVESLIKRHEAFEKLAAAWEDRFVLLEKLTTLEEQEIQRRREEEERAR
RPPTPPPVEEVAQSEAESHAHDSAARTSLDQTTLNQTVSVNGVHSDNDTSQQSVSLSLSV
GKKSEPKRVCKPKQPERGSESESVNGPGRDSGLASSRLEPSATLPSRGGAESDPDTMEGM
LCRKQEMESHSKKAATRSWQNVYCVLRKGSLGFYKDGKSASNGIPYHGEVPISLGEAVCE
VANGYKKRKHVFKLRLGDGKEYLFQAKDESEMSSWIRSILSSIPTGSGDSPGVPRALSRA
MTMPPISPSSGEAGGVTMRNREGKDKDREKRFSFFGKKK
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccatctcaccgacagactttgacagcttggagatccagcagcagtataatgac
atcaacaaccgctgggatctggcagcagagactgactgggataatgagaacagttcagca
cgcctctttgagcgctcgcgaatcaaggctctcgcagatgagcgtgaagcggttcagaag
aagacctttaccaaatgggtgaactctcacttaggccgagtgacctgtcgcattggtgat
ttgtacaccgacctacgcgatggccgtatgctaatccgccttctggaagtgctctcagga
gaacagctgccaaagcccaccaagggacgcatgcgtatccactgcctggagaatgttgat
aaagccctgcagtttctcaaggagcaaaaagtccatctagaaaacatgggctcccatgac
attgtggacgggaatcaccgcctcacactgggtctcatctggaccattatccttcgcttc
cagatccaggacatcagtgtggagacggaagacaacaaggagaaaaagtcagctaaagat
gccctgctactttggtgccaaatgaaaactgctggatatcccaacgtcaacatccacaac
ttcactaccagctggcgagatggtctggcgttcaatgccatcgtgcacaaacacagatct
gacctgattgagtttgacaacctgaagagatccaatgctcactacaatcttcagaatgct
ttcaatgtggctgagaaggaactgggacttaccaagctgctggacccagaagatgtcaat
gttgatcagcctgatgaaaagtccatcattacctatgtggccacctactatcattacttc
tccaagatgaaggccctggcagtggagggcaaaagaattggcaaggtgctggactatgcg
attgaggctgaccagctgatagagaagtatgaaagcctggcttcagagctgctgcagtgg
attgagcagaccatagggacactcaatgacaggcagctagctaactcactgaatgctgtg
cagaaccagcttcaggcttttaactcctaccggactgtggagaaaccccccaaatttaca
gagaaaggaaacttggagattcttctctttaccatccaaagcaagatgcgtgcaaacaac
cagaaagtctatatgccaagagagggcaaacttatctcggacatcaacaaggcatgggag
cgactggaaaaggcagagcatgaacgtgagctggcgctgcgaaatgagttgattcgacag
gagaagctggagatgctcgctgctcgttttgaccgcaaagcagctatgagggagacatgg
ctgagtgagaaccagaggctggtgtctcaggacaactttggaactgatttgggagcggtg
gaagctgccacccgtaaacacgaggccattgagacagacattggggcatattgggagcgt
gtggctgctgtggaggctgttgcaaaagagctggaagcagagggataccatgatgtgcgg
cgtgtaattgctcgaagggataatgtgcttcgactctgggaatatctgaaagagcttctg
gttgcacgcagagagcggctgaatgcccaccgtgacctacagaggctgttccaggagatg
cgctacatcatggactggatggcagatatgaagagtcgtctgcagtctcaggacagtggc
aaacatttgcatgatgtgttggaccttcttcagaaacacactttggtagaggccgacatt
tcagctcaggcagagaggatcaaggcagtgcagggagcagcacagcgcttcacttcctat
gaacaggcctacaaaccatgtgagccaggactagttagtgaaaaggttgacctgctgggt
caagcctacgaagagcttggtcagcttgcctgcaaacgcacagagcggttggaggactct
cgccgtctgtggcagttcatgtgggatgtaggagaggaggcagcctggatccgagagcag
gagcagatcctggctagtggagactgtgggcgtgacctcacttctgctcttcacctgctc
agtaaacatgaggctttcagagatgagatggctgcccgctatggtcccctgagtaacagc
attgctgccggggaagctttggttaacgagggacactttggagccccagaggtcacagag
aggattgaagacatccgttcacagtgggcacatcttgaggagacaactaagctgagagag
cagagactcaaggaagctgtggccctgcatcagttccaaacagatgccagtgacatggag
gcctggatcttggagacacttagacaggtgtcaagtcaggagttgggccatgatgagttc
tccactcaaactatagctcgcaaacagagggagatagatgaggagatccaaagccaccgc
cccgtcatcgactccttgcaagagcaggttcaagcactaccgcaggcctatatacaatcc
cctcaggtggatggccgcctacctgctattgaacagcgttatgaagaactggagactctg
tcagtagctcggcggcaggctctggaaggtgccctggctctttaccgcatgttcagtgaa
gcaggtgcctgccagctctgggtggaagaaaaggagcagtggttagacagcatggagatc
ccaaccaaactggaagacttggaggtggtgcagcagagatttgagactcttgaacctgag
atgaataatctaggcactcgagtcactgatgttaatcaggtggcagagcagctgctgagc
tctgacaactgtagtaaagaccaaatccaccagacacaagaccaactcaacaacagatgg
acagagtttgaacaactggctggtcaaaagaaacatgccctagagtctgccctcaacatc
cagaactaccacctggagtgtaatgagatccagtcttggatgaaggaaaagaccaaggtg
attgaatccactcagagtctgggcaatgacctggctggagtgatggcactgcaacgcaaa
ctcaccggcatggagagggacctggaggccattcagggcaaattggatgacctaagaaac
gaggcagaaaagctggccatggaacatccagatcaggcaggagagatccaaggccgcctg
gctgggattcaagaggtgtgggaggagttgaacgcgaccatgaagcgacgtgaggaatca
ctgggtgaagccagcaagctgcagggcttcctcagggatctggatgatttccagtcctgg
ttgtcccgcacccagacagccgtggcctcagaggacattcccacttctctgcctgaggct
gagagtttactagcccagcatgagaatataaagaatgaggtggataactataaggaggac
tatgagaagatgcgtgcagtcggtgaggaggtcacccaaggtcagacagatgcccagtac
atgttcttggctcagaggctccaggcactggatactggctggcatgagttgcgtcgcatg
tgggagaaccgccacagtcttctggcccaagccttcgacttccagactttcctaagagat
gcaaagcaggcggaagctttcctcaacagccaggagtatgtgctgtcacatacagagatg
ccttccagtcttcagggagcagaagaggccattaagaagcatgaggatttcctcactacc
gcagaggccagtgaggagaagataactggtgtagtggagaacggacggcgcctcatgaat
gactctaatgcaaactctgataagatccaggaaaaagttgattctgtccaggaaaggcat
tttaagaataaggaggctgcaaatgaattgttgacgaagcttaaggacaaccgtgaactt
caacacttcctccaagatgggcaagagctcacattgtggatcaatgagaagatgctgacc
gcacaggacatgtcttatgatgaggccagaaatcttcacagcaagtggcagaagcaccag
gccttcatggcagagctggcctctaacaaagactggctggacaaaattgacaaggagggt
caggctctggtggcagagaagcctgagctgaaacctgttgtccagcagaccctggaggac
ctacagcgtcagtgggaggagctggaaggcaccacacgcaccaaggcccagtgtttgttc
gatgctaacagggctgagctctttacacagagctgctccgctctagatgtctggctgaag
aacctcgagggtcagctgcataatgacgaatatggcaaagatttgaccagtgtcaacatc
ttgctcaagaagcaccagatggtggagcaccagatggaggtcagagagaaggaggtgcag
tccctgcagtctcaggctctagcgctgtcccaggaggatgctggactagcagaggtagat
ggtcagcaaaggcgtgtcactgacaacttctcaaacctccaggagcctctcaaactgagg
agacagagactactcgcctccaaagaagcacatcagttcaacagagatttggaagatgaa
attctatgggtgaaagagaggatgcccctggcaacctccacagaccatggaaaagatctg
cctaccgttcagctgcttatcaagaagaaccagacattacataaggagatccagggccac
cagcctcgcattgatgacatccacagacgaggaaagactcagagccaggtcgatggtgag
agacagtctgtcctagaggagcgtctcgttgagctgaaggacctttgggaccaactgatt
ggcgagacagacaaacgtcgtgcacgtttaatagaggccaatcgcgcccagcagttctat
gctgatgcagcggaggccgaagcctggatgggcgaacaagagctacacatgatgtcagaa
gaaaaggccaaggacgagcaaagcgcactagtgatggtcaagaagcaccagatcgtggaa
caggcactcgaagactacgcccaaaccattcaccagctagccaatagcagccgtctcatg
gtcaccagtgaacacccagagagtgagagaatcaccttacggcaagcccaagtggacaag
ctgtatgccgggttgaaagacctcgctgaggagcgtcgtgggcggcttcaggagagactg
cggctgacccagctgaagcgggaggtggatgacctagaacagtggattgctgagagggag
gtggttgctggctcccatgaattaggacaggactatgaacatgtcacaatgctgagggac
aagttccgggagtttgctcgtgacaccagcactattggccaagagcgagtagatggtgta
aatgggttggcagatgacttgattgagtcgggtcatcctgagaatgccagcgtggctgag
tggaaggatgggttaaatgaggcctgggcagatctgctggagctgattgacacacgcaca
caaatgttggctgcctcctatgagttgcaccgcttccatcaggatgccatggaggtgctc
ggacgtgttaaggaaaagcatgaggcactgccttctgaccttggccgtgacctgaacact
gtccagcatctacacaggcagcacaacacttttgaacatgacatccaggccctcagtgga
caggtgaaccaggtgcaagaggatgcagcacggctgcagaaagcttatgctggagagaaa
gctgatgaaattcacaggagtgaaaatgctgtgacttctgcctgggagggcttgctcgag
actggtcaggcccgcaggctcctcctgctggacacggtggagaagttccgcttcttcaac
atggtgcgagacctcatgctatggatggatggtgtcaacctgcaaattgacgcacacgac
agtccaagggatgtatcatctgcagggctggtcattgccaatcatcaggacatcaagtca
gagattgagaccagggccgacagctttactgcctgtactgagatgggaaatactctcatt
aacaacaatcactatgcagctgatgagattcgggagaaactggttcagctccaggaaaag
agagacaggatcaacaaaaactggctagacaagatggaccatctacaaattgtgctggag
gtgctgcagtttggacgggatgcctgtgtggcggagtcttggttggcaggtcaagaacct
ctggtgcgagcagcagagctgggcacaaatgtggacgaggtcgagagcctaattaagcgt
cacgaggcctttgaaaaacttgctgcagcctgggaagatcgctttgtccttctggagaaa
ctcactacacttgaggagcaggagatccagaggaggcgagaggaagaggagagggctcgc
cgaccccccacaccacccccagttgaagaagtggcacaatctgaggcagaaagtcatgca
catgattctgcagccagaaccagtctggaccagaccaccctcaatcagactgtgtcagtg
aatggagtacatagtgataatgacacatctcagcagtcagtatcgctatcgttgtcagtg
ggaaagaaatcagaacctaaacgtgtgtgtaagccaaagcagccggagcgtggctcagag
tcggagtcggtgaacgggccaggtagggacagtgggctggcatcttctcgcctcgaaccg
tctgcaacgttaccaagcaggggtggagcagagtcagacccagacaccatggaggggatg
ctctgtcgaaaacaggagatggagtcccacagcaaaaaggcagctaccaggtcttggcag
aacgtgtactgtgtcttaagaaaaggaagtctgggtttctataaagatggcaagagtgcc
agcaacggaattccatatcatggagaggtacccatcagcctcggcgaggctgtgtgtgag
gtagcaaacggctataagaagaggaaacatgtattcaagctcaggctaggggatggaaaa
gagtacctgttccaagccaaggatgagtcggaaatgagctcctggatccgctccatcctc
agttccattccaacaggatcaggagactcacccggagttccgcgggccctcagccgcgcc
atgacgatgccccccatctcccccagctcaggtgaagctggaggcgtcaccatgcgcaac
agagaggggaaagacaaggatcgagagaagaggttcagcttctttggcaagaagaaatag
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integrated database retrieval system
