Hippoglossus hippoglossus (Atlantic halibut): 117775228
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Entry
117775228 CDS
T07778
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04217
Necroptosis
hhip04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117775228 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117775228 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117775228 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117775228 (tnfaip3)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117775228 (tnfaip3)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C64
117775228 (tnfaip3)
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117775228 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
117775228
NCBI-ProteinID:
XP_034464059
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All DBs
Position
15:6344678..6356806
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AA seq
823 aa
AA seq
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MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAASGGLMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGGFRARFQAELLQSQEFTQTGLRYTTMNWEDEWEKIVKMAS
PISSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGDFEELKVHFLMEKEQQQ
KERLLKDYLFLIEIPVIGLGYDVLRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQVTTGGGA
RIEGVIQAKGGGVQGGVGVMVGSETEVNSRGARSSSPPSSSSGRGVVISSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQSQGAPGAGTAATGLPGPNGGPTV
PHPAQGSGWTQWGGSETETERCSMCRQEAFRIFNGLCPPCMQRQQAPERGEPQQSNPRTE
ASSSAWSQARDAERPCLTITPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQ
TNHHMTPPAAPAQSRHGLEAGFQNATRCRGPGCGAVGKTMLEGYCDKCYVKEQSTRLNQV
AHRTPHSPPLVMRDRAVKPRSSQQSQTQTQCRRSGCSNVSPGCTDLCPECHTRGQGREVG
RRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtctccaacctgctgaaggcg
gtgaagatccgtcagcgagtgcccaacgacgtggtgaagccggcggccagcggcggcctg
atgcaccacctgcggggcatgcacaggtacactctggagatgatcgccatgaaccacttc
ccgcaggccttcagggaggtggtgcaggctgccatcctggaccgagccatgcaggcctcc
ctggagcaggagaagaagctcaactggtgtcgggaggtgaagaagatggtgcccttacgc
accaatggagatgggaactgtttgctccacgcggcctctcagtacatgctgggcgttcag
gacacagaccttgttcttcggaaagccctccatggcgttttgaaggagacggacactggt
ggctttagagctcgcttccaggcagagctgctccagtcccaggagttcacccagaccgga
ctccgatacaccaccatgaactgggaggacgagtgggaaaagattgtgaagatggcgtct
cccatctccagtagcaacggcctccagtttgactctctggaggacattcacatcttcgtc
ctctcgaacattctccgcagacccatcatcgtcattgcagaccaggtggtcagaagtatg
aaatctggctcctccatctctcctctgaatgtgggtgggatttatctgccgctgcactgg
ccacccacagagtgctacaaatacccaatagtgcttggctatgactcccagcactttgca
cccctcatcaccatcaaagacagtggtccagagatccgtgctgtgccgctgatcaaccca
ggacggggggacttcgaggagctgaaggttcacttcctgatggagaaagagcagcagcag
aaagagaggcttctcaaagactacctgttcctgatagagatccctgtcataggcttgggc
tacgatgttttacggatcatcaacgctgcaaggctggacgagggcaatcttcctgaagac
atgaacctgatggaggactacctgcagctcgtcaaccacgagtaccagcgctggcaggag
gacaaggagcaggcatgggctgcccagccacagcgcccaccacccttttctgtctcccag
ctctccctcatcgaaatccgctgtgccacaccacgatgcaccttctacgtctctgttgac
acgcagcctcattgccacgaatgctttgagaagcgacaggtcaccaccggtggaggagca
aggatagaaggggtgatacaggccaagggaggaggggtacaaggtggggttggtgtgatg
gtgggatcagagaccgaggtgaactctagaggagctcgaagcagcagccctccgtcctcc
tcgtctggaagaggggtggtgatctctagcccccgctcagcaccacccaccgcccccagc
ctcagcctgtacagtgaaactcatgccatgaagtgcaagacacccggctgcctcttcact
cttagcgtagagcatgatggactttgtgagcgctgcttcaactccaggcagagccaagga
gcccctggagctggaactgctgccacaggactcccaggccccaatggggggcctacagtt
ccccacccagcccagggctccggctggacccagtgggggggctctgagacagagacagag
cgctgcagcatgtgtagacaggaggcgttcaggatattcaatggcctgtgtccaccctgc
atgcagagacagcaggctccagagaggggagagcctcagcagagcaaccccaggactgag
gcctcgtcttcagcttggagccaggccagggacgctgagcggccgtgcctcaccataaca
ccaggacacacctcagcctggcaggcccctctcgcacggccttgtaaaagatctggttgc
cagttctttgggacgccagagaagttgggtttctgcactatttgctacgtagactatcag
accaaccaccacatgacacctcccgctgccccggcccagagccggcatggtttggaggca
ggcttccagaatgccaccaggtgtcgtgggcctgggtgtggtgcggttggcaagacaatg
ctggagggctactgcgacaagtgctacgtcaaagagcaaagcacacggctcaaccaagtg
gcacatcgcacaccacactcgcctcctttagtcatgcgtgaccgagcagttaaacccaga
tcttcgcagcaatcccagacccagactcagtgccggcggagtggctgcagtaacgtgtcc
ccgggttgcacagacctttgcccagagtgccacacacgaggccagggcagagaggtgggc
aggcgggcgcaggcgcccaaggaaaagtccaagcagcggtgtcggacgcagggctgcgac
cactacgccaaccaagagaaacagggctactgcaacgagtgcgaccacttcaaacagatc
taccgcggttga
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